| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 139 [0] | [0] 143 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 137 (0.900) | 74/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
Only 100 of 139 total aligned reads displayed.
TAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTGGAGTTTGGTTGCGCTGCTAT > NC_000913/389849‑389946 | tAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCtt < 1:1317818/49‑1 (MQ=255) aaTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTg < 1:2954308‑M1/49‑2 (MQ=255) aaTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTg < 1:2338165‑M1/49‑2 (MQ=255) aTAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTga < 2:1238499‑M1/49‑3 (MQ=255) tAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaa > 2:1701148‑M1/1‑46 (MQ=255) aGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaata > 2:2644077‑M1/1‑45 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat < 2:5748329‑M1/50‑7 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat > 1:5744191‑M1/1‑44 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaata < 1:4366813‑M1/49‑6 (MQ=255) gAAACAGCAATAATTTTATATTCACTGAAAATA‑TTTTAATCTTgaatat < 1:5647494‑M1/49‑7 (MQ=255) gAAACAGCAATAATTTTATATTAACTGAAAATATTTTTAATCTTgaatat > 1:945163‑M1/1‑44 (MQ=255) aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatatt < 2:2827609‑M1/50‑8 (MQ=255) aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatatt < 1:2215357‑M1/50‑8 (MQ=255) aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatatt < 1:3166845‑M1/50‑8 (MQ=255) aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat > 2:4775588‑M1/1‑43 (MQ=255) aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat > 1:304124‑M1/1‑43 (MQ=255) aaaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatat > 1:4829830‑M1/1‑43 (MQ=255) aaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatatta < 2:4570882‑M1/50‑9 (MQ=255) aaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatatta < 2:4784422‑M1/50‑9 (MQ=255) aaCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatatta < 2:733917‑M1/50‑9 (MQ=255) aCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattat < 2:3839026‑M1/50‑10 (MQ=255) aCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattat > 1:4500075‑M1/1‑41 (MQ=255) aCAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattat < 1:959645‑M1/50‑10 (MQ=255) cAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatc > 2:3471561‑M1/1‑40 (MQ=255) cAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatc < 2:2699486‑M1/50‑11 (MQ=255) cAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatc > 2:1469381‑M1/1‑40 (MQ=255) cAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatc < 2:5115829‑M1/50‑11 (MQ=255) cAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTGgaatattatc < 1:2714996‑M1/50‑11 (MQ=255) aGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcg < 1:4094472‑M1/50‑12 (MQ=255) aGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcg > 2:4411292‑M1/1‑39 (MQ=255) gCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgg > 2:5146903‑M1/1‑38 (MQ=255) gCAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgg > 1:905458‑M1/1‑38 (MQ=255) cAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcggg < 1:1142717‑M1/50‑14 (MQ=255) cAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcggg > 1:3431569‑M1/1‑37 (MQ=255) cAATAATTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcggg > 2:5470068‑M1/1‑37 (MQ=255) aataatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggc > 2:4118046‑M1/1‑36 (MQ=255) aataatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggc > 2:3969810‑M1/1‑36 (MQ=255) aataatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggc < 2:3915689‑M1/50‑15 (MQ=255) ataatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcg > 2:1960521‑M1/1‑35 (MQ=255) taatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgt < 1:3373758‑M1/50‑17 (MQ=255) aatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgt > 1:818723‑M1/1‑33 (MQ=255) aatTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgt > 2:5706654‑M1/1‑33 (MQ=255) atTTTATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgtt < 2:156812‑M1/49‑18 (MQ=255) ttttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaa < 1:1094916‑M1/50‑20 (MQ=255) ttATATTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaa > 2:3288385‑M1/1‑29 (MQ=255) tataTTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaa < 1:4378758‑M1/49‑22 (MQ=255) tataTTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaa > 2:1503484‑M1/1‑28 (MQ=255) tataTTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaa > 2:2504386‑M1/1‑28 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata > 2:3575184‑M1/1‑27 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata > 1:1926542‑M1/1‑27 (MQ=255) atatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata > 2:2751007‑M1/1‑27 (MQ=255) tatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatat < 1:798097‑M1/50‑25 (MQ=255) tatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatat > 2:3005312‑M1/1‑26 (MQ=255) tatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata < 1:1678988‑M1/49‑24 (MQ=255) tatTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaata < 2:261524‑M1/49‑24 (MQ=255) atTCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatat > 2:1060043‑M1/1‑25 (MQ=255) ttCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatta < 2:3563362‑M1/50‑27 (MQ=255) ttCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatta > 1:3833310‑M1/1‑24 (MQ=255) ttCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatt < 2:4073221‑M1/49‑26 (MQ=255) tCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatta > 2:5681881‑M1/1‑23 (MQ=255) tCACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatatta > 2:4143916‑M1/1‑23 (MQ=255) cACTGAAAATCTTTTTAATCTTgaatattatcgggcgttaaaatattaca > 2:3915368‑M1/1‑22 (MQ=255) cACTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattac < 2:4536387‑M1/49‑28 (MQ=255) cTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacatt < 2:2513613‑M1/50‑31 (MQ=255) cTGAAAATATTTTTAATCTTgaatattatcgggcgttaaaatattacatt > 1:1314898‑M1/1‑20 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtg < 1:3529412‑M1/50‑34 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtg > 2:3727582‑M1/1‑17 (MQ=255) aaaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgt < 2:4378003‑M1/49‑33 (MQ=255) aaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtgg > 1:2811487‑M1/1‑16 (MQ=255) aaaTATTTTTAATCTTgaatattatcgggcgttaaaatattacattgtgg > 2:2099854‑M1/1‑16 (MQ=255) atatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggtt > 1:413067‑M1/1‑14 (MQ=255) atatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggtt < 1:1093649‑M1/50‑37 (MQ=255) atatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggtt < 2:156318‑M1/50‑37 (MQ=255) atatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggtt > 1:1687740‑M1/1‑14 (MQ=255) tatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggttt < 1:5801869‑M1/50‑38 (MQ=255) tatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggttt < 2:2756264‑M1/50‑38 (MQ=255) tatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggttt > 2:1746792‑M1/1‑13 (MQ=255) tatTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggttt < 2:4794352‑M1/50‑38 (MQ=255) atTTTTAATCTTgaatattatcgggcgttaaaatattacattgtggtttt > 1:4622170‑M1/1‑12 (MQ=255) tttttAATCTTgaatattatcgggcgttaaaatattacattgtggtttt < 1:717699‑M1/49‑39 (MQ=255) tttAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaa > 2:2547214‑M1/1‑9 (MQ=255) tttAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaa > 2:1630487‑M1/1‑9 (MQ=255) ttAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaat > 2:5545136‑M1/1‑8 (MQ=255) ttAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaat > 1:599650‑M1/1‑8 (MQ=255) ttAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaat > 2:4945144‑M1/1‑8 (MQ=255) tAATCTTgaatattatcgggcgttaaaatattacattgtggttttcaatg > 1:1418304‑M1/1‑7 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc > 2:3112554‑M1/1‑6 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc > 1:4130364‑M1/1‑6 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatg < 1:5089787‑M1/49‑44 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatg < 2:3014781‑M1/49‑44 (MQ=255) aaTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatg < 2:699872‑M1/49‑44 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcg < 2:1902687‑M1/50‑46 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc < 1:5737344‑M1/49‑45 (MQ=255) aTCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgc < 2:2271757‑M1/49‑45 (MQ=255) tCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcgt > 1:5371794‑M1/1‑4 (MQ=255) tCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcgt > 2:1839499‑M1/1‑4 (MQ=255) tCTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcgt > 1:2868207‑M1/1‑4 (MQ=255) cTTgaatattatcgggcgttaaaatattacattgtggttttcaatgcgt > 2:2896330‑M1/1‑3 (MQ=255) ttgaatattatcgggcgttaaaatattacattgtggttttcaatgcgtta > 1:9356‑M1/1‑2 (MQ=255) tgaatattatcgggcgttaaaatattacattgtggttttcaatgcgttat > 2:3557532‑M1/1‑1 (MQ=255) | TAATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTTATTTATAGCTGTTGGTTATTATTTTTTGGAGTTTGGTTGCGCTGCTAT > NC_000913/389849‑389946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |