| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,872,030 | Δ1,437 bp | [dgcJ] | [dgcJ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1872030 | 1873466 | 1437 | 223 [0] | [0] 219 | [dgcJ] | [dgcJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1872029 | 0 (0.000) | 218 (1.470) | 84/96 | 0.0 | 100% | intergenic (+169/‑12) | cdgI/dgcJ | putative c‑di‑GMP binding protein CdgI/putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1873467 = | 0 (0.000) | coding (1427/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
Only 100 of 223 total aligned reads displayed.
AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1871980‑1872029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA > NC_000913/1873467‑1873514 AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG < 2:5383009/50‑1AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG < 2:2027465/50‑1 GGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGA < 1:289387/50‑1 GCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGAT < 2:1377690/50‑1 GCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGAT > 1:731107/1‑50 GCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGAT < 2:4417057/50‑1 CCGCAATCGAGCTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG > 1:3542816/1‑50 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG < 1:2350304/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG < 2:3776718/50‑1 GCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG < 1:1128038/50‑1 GCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 2:1933347/1‑50 GCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG < 1:2034434/50‑1 GCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:207054/1‑50 GCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:2755018/1‑50 GCAATCGAACTTTATCTGGTTTTCTCGTTTCACGAACCGAAGGAGATGCG < 1:1691597/50‑1 CAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 2:794657/1‑49 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:4349169/1‑50 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 2:2467591/1‑50 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:5173763/1‑50 ATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTAT < 1:114000/50‑1 ATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:110329/1‑49 TCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGTTGCGTAT > 1:104780/1‑49 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAA < 2:1197635/50‑1 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATA > 2:2944330/1‑48 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATA > 1:3998122/1‑48 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG > 2:4257481/1‑50 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG > 2:3753232/1‑50 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG > 2:5060793/1‑50 ACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGC > 2:1259564/1‑50 CTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCT < 2:3856543/50‑1 TTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTT > 2:4263442/1‑50 TTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTT > 1:1366847/1‑50 TTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTC > 2:2918078/1‑50 TATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTT < 1:2811630/48‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 1:1085409/49‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 1:5250867/49‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC > 2:5825134/1‑49 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 2:2617901/49‑1 TCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGA > 1:5332313/1‑50 TCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCG < 1:3262915/49‑1 CTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT > 1:3615089/1‑50 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAG > 1:1476909/1‑50 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAG < 2:5314155/50‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAG > 2:2958647/1‑50 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAG > 1:5509470/1‑50 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGA < 1:4443832/49‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGA < 2:3512127/49‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGA < 1:3298236/49‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATG < 1:1270495/48‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATG < 1:4780183/48‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT < 2:367619/47‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT < 2:5578373/47‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT < 2:2832681/47‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGA < 2:1018/46‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGA < 2:1173382/46‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGA < 1:494937/46‑1 TTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGC > 2:5677259/1‑50 TTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGC > 2:4863609/1‑50 TTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGC < 2:1452837/50‑1 TTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG > 2:3100491/1‑50 TTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG > 1:2042276/1‑50 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGT > 1:318748/1‑50 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGT > 1:3904046/1‑50 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGT > 1:4872549/1‑50 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG < 2:1286706/49‑1 CTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTT < 2:5264077/49‑1 TCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTA > 1:4274503/1‑50 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA > 1:905485/1‑50 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA < 2:704152/50‑1 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTAT < 2:1120924/49‑1 TTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATAT < 1:4572215/50‑1 TCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGT > 1:2575661/1‑50 TCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATG < 1:3691199/49‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC < 1:4031000/49‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC > 2:3328748/1‑49 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC > 1:4731352/1‑49 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC < 1:2619609/49‑1 CTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA > 1:2109890/1‑50 TAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA > 1:3046133/1‑49 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAA < 1:3191972/50‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAA < 2:2112297/50‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATA < 2:796624/49‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT < 1:3777651/48‑1 CCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 2:3597286/1‑50 CCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 2:2254419/1‑50 CGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:4125928/1‑49 CGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 2:2948880/1‑49 AAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAG < 1:461116/50‑1 AAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:1864008/1‑47 AAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 2:5531906/1‑47 AAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 2:3483217/1‑47 AAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 2:3703118/1‑47 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGA < 1:5278393/50‑1 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAG > 2:2686471/1‑49 GGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAA > 2:1573986/1‑50 GGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAA < 2:104844/50‑1 GGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAA > 1:2927041/1‑50 GAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAAC < 2:5606771/50‑1 GAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAA > 1:5704578/1‑49 AGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA < 1:2958571/50‑1 AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1871980‑1872029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA > NC_000913/1873467‑1873514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |