| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 133 [0] | [0] 132 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 110 (0.870) | 59/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
Only 100 of 133 total aligned reads displayed.
CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATC > NC_000913/2558649‑2558746 | aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:3631103‑M1/1‑49 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 2:3773622‑M1/1‑49 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGga < 1:4150534‑M1/50‑3 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGg > 2:4529864‑M1/1‑48 (MQ=255) gCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaa < 1:3308333‑M1/49‑4 (MQ=255) ccGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaat < 2:5427742‑M1/50‑6 (MQ=255) ccGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaa < 2:468079‑M1/49‑5 (MQ=255) cGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatg > 2:3793888‑M1/1‑44 (MQ=255) cGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatg > 1:516228‑M1/1‑44 (MQ=255) cGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatg < 1:4625289‑M1/50‑7 (MQ=255) gAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc < 2:2790123‑M1/50‑8 (MQ=255) gAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 2:2298010‑M1/1‑43 (MQ=255) gAACAATGTGGTCTTTAATTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 1:2112365‑M1/1‑43 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcg < 2:5590737‑M1/50‑9 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcg < 2:4270094‑M1/50‑9 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 2:771556‑M1/1‑42 (MQ=255) aCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcga < 1:464518‑M1/50‑10 (MQ=255) aCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 2:4435852‑M1/1‑41 (MQ=255) aCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 1:5562190‑M1/1‑41 (MQ=255) aaTGTGGTCTTCAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagt > 1:5667516‑M1/1‑39 (MQ=255) aTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagt > 2:4221764‑M1/1‑38 (MQ=255) gtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgat > 1:388959‑M1/1‑36 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttc < 2:3823483‑M1/50‑18 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttc < 1:5353976‑M1/50‑18 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt > 1:78225‑M1/1‑33 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt < 2:5656763‑M1/49‑17 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt < 2:1316212‑M1/49‑17 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt > 2:1561943‑M1/1‑33 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt < 2:1891507‑M1/49‑17 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt < 2:1886352‑M1/49‑17 (MQ=255) tCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttca > 2:4249173‑M1/1‑32 (MQ=255) tCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttca > 1:2661386‑M1/1‑32 (MQ=255) cTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcac > 1:1066724‑M1/1‑31 (MQ=255) cTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcac > 2:1710301‑M1/1‑31 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc > 2:4728596‑M1/1‑30 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc > 2:5105556‑M1/1‑30 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc > 1:3040468‑M1/1‑30 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc > 1:4059100‑M1/1‑30 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc < 1:2572788‑M1/48‑21 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcac < 2:3040780‑M1/47‑20 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcac < 2:757362‑M1/47‑20 (MQ=255) aGTTTCATAGGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgt > 2:1450682‑M1/1‑27 (MQ=255) aGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgt > 2:5072222‑M1/1‑27 (MQ=255) gTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtc < 1:1143908‑M1/49‑24 (MQ=255) gTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtc < 1:3529374‑M1/49‑24 (MQ=255) gTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtc < 1:4830507‑M1/49‑24 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcac < 1:3883320‑M1/50‑26 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcac < 1:3313526‑M1/50‑26 (MQ=255) ttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcacc > 1:1757220‑M1/1‑24 (MQ=255) ttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcacc > 1:2520315‑M1/1‑24 (MQ=255) tCATACGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccg > 2:4895621‑M1/1‑23 (MQ=255) tCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccg > 1:4076484‑M1/1‑23 (MQ=255) tCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcacc < 1:1847738‑M1/49‑27 (MQ=255) tCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcacc < 2:190589‑M1/49‑27 (MQ=255) cATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccg < 2:1128898‑M1/49‑28 (MQ=255) cATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccg < 1:4820601‑M1/49‑28 (MQ=255) cATAAGTCGTACCCTCAGGCAGgaaatgcgagtgatttcaccgtcaacgg > 1:3811537‑M1/1‑22 (MQ=255) aTAAGTCGTTCCCTCAGGAAGgaaattcgagtgatttcaccgtcaccgg > 2:2607433‑M1/1‑21 (MQ=255) aTAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggc < 2:2238112‑M1/50‑30 (MQ=255) aaGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggca > 1:3875436‑M1/1‑19 (MQ=255) aGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcaca < 2:5653991‑M1/50‑33 (MQ=255) aGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcaca < 2:1025170‑M1/50‑33 (MQ=255) aGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcac > 2:3001855‑M1/1‑18 (MQ=255) aGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcac > 2:745420‑M1/1‑18 (MQ=255) gTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaa > 2:5329522‑M1/1‑17 (MQ=255) gTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaa > 2:2555259‑M1/1‑17 (MQ=255) tCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaac < 1:5819228‑M1/50‑35 (MQ=255) cGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc > 1:430005‑M1/1‑15 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggtacaacc < 1:1333505‑M1/49‑36 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccg < 2:5047482‑M1/50‑37 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc < 1:5424022‑M1/49‑36 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc < 2:1687138‑M1/49‑36 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc < 2:180568‑M1/49‑36 (MQ=255) ttCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccga < 2:1962085‑M1/50‑38 (MQ=255) ttCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccga < 1:3228597‑M1/50‑38 (MQ=255) cccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatc > 2:215139‑M1/1‑11 (MQ=255) cccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgat < 1:4374706‑M1/49‑39 (MQ=255) cccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgat < 1:5356841‑M1/49‑39 (MQ=255) cccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgat < 1:4396944‑M1/49‑39 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 2:3722631‑M1/50‑41 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc > 2:2307050‑M1/1‑10 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 2:1974011‑M1/50‑41 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 1:2392502‑M1/50‑41 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 1:2868893‑M1/50‑41 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatc < 1:5576218‑M1/49‑40 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatc < 2:1358607‑M1/49‑40 (MQ=255) cTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccg < 1:2939991‑M1/50‑42 (MQ=255) cTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccg < 1:5181428‑M1/50‑42 (MQ=255) tCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgc > 2:5678746‑M1/1‑8 (MQ=255) cAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccgc > 1:2748324‑M1/1‑7 (MQ=255) aggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcca < 1:4833794‑M1/50‑45 (MQ=255) aggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcca < 1:443600‑M1/50‑45 (MQ=255) aggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcc > 1:4872420‑M1/1‑6 (MQ=255) aggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcc < 2:3381776‑M1/49‑44 (MQ=255) gaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa < 2:320074‑M1/50‑47 (MQ=255) gaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaa > 1:2519206‑M1/1‑4 (MQ=255) aaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaa < 2:3405107‑M1/50‑48 (MQ=255) aggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaa < 1:2945260‑M1/50‑49 (MQ=255) aggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 2:4777774‑M1/1‑2 (MQ=255) ggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 2:1128068‑M1/1‑1 (MQ=255) | CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATC > NC_000913/2558649‑2558746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |