| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 131 [0] | [0] 134 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 128 (1.360) | 68/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
Only 100 of 128 total aligned reads displayed.
ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389851‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > NC_000913/399806‑399853 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:4069471/1‑49 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT < 1:465714/50‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:108817/49‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:5896414/49‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTGGAATA < 1:4932033/49‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:665629/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:3615346/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:4059448/1‑49 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:4987281/1‑49 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:2582316/1‑50 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:1444062/1‑50 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT < 1:6998912/50‑1 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT > 1:1800394/1‑50 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT < 1:5207841/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:3392941/1‑50 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:2478130/1‑50 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:1943203/1‑50 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:1739320/50‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 1:3076224/50‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 1:5536724/50‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 1:2900071/50‑1 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:4908562/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:2346966/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:6724712/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:1603468/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:2847648/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:4273355/1‑50 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG < 1:4547521/50‑1 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:4289558/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:5453734/1‑50 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT < 1:6857489/49‑1 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:4970411/50‑1 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:5505224/50‑1 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:4671489/50‑1 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:824061/1‑49 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:7102239/1‑50 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:4093551/1‑50 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAA < 1:4454331/49‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:76495/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA < 1:6188564/49‑1 ATATTCACTGAAAATATTTTTAATCTTGACTATTATCGGGCGTTAAAATA > 1:1265886/1‑50 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA < 1:5543490/49‑1 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:2986278/1‑49 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:5070195/1‑50 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTAC < 1:1654455/49‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:6795737/1‑50 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:1268698/1‑50 ACTGAAAATATGTTTAATCTTGAATAGTATCGGGCGTTAAAATATTACA < 1:6930052/49‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:1584250/1‑50 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:4355972/1‑50 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT < 1:256335/50‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:6618917/1‑50 TGAAAATATTTTTAATCTTGAATATTATCGGGCGTTATAATATTACATTG > 1:6402739/1‑50 TGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG > 1:3470098/1‑50 GAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT > 1:3009079/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:4478806/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:650848/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:1691667/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:2050147/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT < 1:5655659/49‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT < 1:326860/49‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 1:4128622/48‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 1:4600373/48‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:4136497/1‑50 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:2172390/1‑50 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:6988458/1‑50 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:229721/1‑50 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:3762188/50‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT > 1:1162781/1‑50 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 1:6515998/50‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 1:2894707/50‑1 TATTTTTAATCTTGAATATTATCTGGCGTTAAAATATTACATTGTGGTTT < 1:6287853/50‑1 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:4266486/1‑50 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:780711/49‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:1854864/49‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:1321581/49‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:4184753/49‑1 TTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC > 1:3217639/1‑49 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA > 1:5636082/1‑50 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA > 1:704855/1‑50 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCA < 1:377706/49‑1 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCA < 1:3330404/49‑1 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT > 1:1049810/1‑50 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 1:1942242/1‑50 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:4794729/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:682290/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:4716670/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:2961779/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:1891785/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:3859643/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:2896752/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:10936/49‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG < 1:3492841/50‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC < 1:6054502/49‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC < 1:5141580/49‑1 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:5745915/1‑50 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:3801810/1‑50 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:6154334/1‑49 TTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > 1:5343918/1‑50 TTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > 1:4884313/1‑50 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389851‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > NC_000913/399806‑399853 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |