| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 108 [0] | [0] 106 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 104 (1.100) | 65/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
Only 100 of 108 total aligned reads displayed.
CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 | cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 1:3946264/50‑1 (MQ=255)cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 1:4719405/50‑1 (MQ=255)cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:622873/1‑50 (MQ=255)cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 1:6331210/50‑1 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:3249649‑M1/1‑48 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:1083123‑M1/1‑47 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:4508785‑M1/1‑47 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:6954751‑M1/1‑47 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:897864‑M1/1‑47 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc < 1:5652034‑M1/48‑2 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc < 1:2004964‑M1/48‑2 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcga < 1:6850270‑M1/49‑4 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcga > 1:3759586‑M1/1‑46 (MQ=255) gCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:2177188‑M1/1‑44 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaac < 1:2424602‑M1/49‑7 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaac < 1:3958513‑M1/49‑7 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:349848‑M1/1‑43 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:6297068‑M1/1‑43 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag > 1:2053203‑M1/1‑42 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag > 1:2992514‑M1/1‑42 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:6070123‑M1/1‑41 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:1373003‑M1/1‑41 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:3553637‑M1/1‑41 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt > 1:921435‑M1/1‑40 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt > 1:6945627‑M1/1‑40 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:3274749‑M1/50‑11 (MQ=255) atGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc > 1:685291‑M1/1‑39 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg > 1:4211478‑M1/1‑38 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg < 1:6524921‑M1/50‑13 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:511007‑M1/49‑12 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc > 1:941503‑M1/1‑36 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:1332791‑M1/50‑15 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:2734163‑M1/50‑15 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg < 1:1591332‑M1/50‑16 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg < 1:915645‑M1/50‑16 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg < 1:891710‑M1/50‑16 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg > 1:6690400‑M1/1‑34 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg < 1:5892813‑M1/50‑17 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg < 1:4974815‑M1/50‑17 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg < 1:5069301‑M1/50‑18 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct < 1:1548969‑M1/50‑20 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct < 1:4922779‑M1/50‑20 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:5101642‑M1/50‑21 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:6503581‑M1/50‑21 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:6515454‑M1/1‑30 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:1742661‑M1/1‑30 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:3076740‑M1/1‑30 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaa < 1:2618989‑M1/50‑23 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaa < 1:2826589‑M1/50‑23 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:1663172‑M1/1‑28 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:3143380‑M1/1‑28 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:4277885‑M1/49‑24 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:6367409‑M1/49‑24 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:5299864‑M1/1‑26 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:4971189‑M1/1‑25 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:1514341‑M1/49‑26 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:3168320‑M1/1‑24 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:318585‑M1/49‑26 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:19695‑M1/1‑24 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:1505852‑M1/1‑24 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatt < 1:378171‑M1/49‑27 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:1234586‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:5802243‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat < 1:1780094‑M1/50‑29 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:6909757‑M1/1‑22 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:3907169‑M1/1‑20 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct < 1:4068469‑M1/50‑32 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct < 1:690846‑M1/50‑32 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc < 1:2811817‑M1/49‑31 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc < 1:5995642‑M1/49‑31 (MQ=255) cATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt > 1:2262994‑M1/1‑18 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg > 1:5960318‑M1/1‑17 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt < 1:3081293‑M1/49‑33 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc < 1:147041‑M1/50‑35 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc > 1:6444284‑M1/1‑16 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc < 1:2021272‑M1/50‑35 (MQ=255) ttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:1144709‑M1/1‑14 (MQ=255) ttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:3919867‑M1/1‑14 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:117155‑M1/1‑13 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:3203850‑M1/1‑12 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcg < 1:6234733‑M1/49‑38 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcg < 1:3810960‑M1/49‑38 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:6643424‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat < 1:4724775‑M1/50‑40 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt > 1:5460935‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt < 1:5336562‑M1/50‑41 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt < 1:6214220‑M1/50‑42 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt < 1:3054898‑M1/50‑42 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt < 1:6776061‑M1/50‑42 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttg < 1:2004752‑M1/50‑43 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc > 1:4647520‑M1/1‑7 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc > 1:2366925‑M1/1‑7 (MQ=255) aGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgc > 1:4848145‑M1/1‑7 (MQ=255) gCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcc < 1:2518366‑M1/50‑45 (MQ=255) ccgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccc < 1:6007382‑M1/50‑46 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:3070108‑M1/50‑48 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc > 1:6704611‑M1/1‑2 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc < 1:5631971‑M1/50‑49 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg > 1:567593‑M1/1‑1 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg < 1:1558577‑M1/50‑50 (MQ=255) | CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |