| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 203 [0] | [0] 207 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 195 (1.310) | 82/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
Only 100 of 195 total aligned reads displayed.
AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:3707557/50‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 2:2527609/1‑50 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 2:4328393/50‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:110113/1‑50 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:4931079/50‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 2:4575433/1‑50 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 2:5623249/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 2:5638806/1‑49 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT < 1:3597652/50‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT < 1:1605875/50‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:565627/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 2:1194781/49‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:2434251/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 2:1656461/1‑49 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:528184/1‑50 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 2:5430043/50‑1 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:4413487/1‑50 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 2:2574844/1‑50 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 2:1622777/50‑1 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTAT < 1:5141009/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:2509289/1‑50 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:4204645/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:85100/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 2:2352484/50‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:4033588/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:3897508/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 2:1369805/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:3403084/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 2:3616516/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:3085026/50‑1 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 2:2614326/1‑50 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:4081895/1‑50 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:1252821/1‑50 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG > 1:2763360/1‑50 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 1:2207858/1‑50 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 2:4486584/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGATTATTATCGGGCG > 1:5339198/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 2:192158/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:2124459/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:4782707/1‑50 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 2:5226450/1‑50 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:5411945/1‑50 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 2:970868/1‑49 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA < 2:2715427/50‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT < 2:4169041/49‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT < 2:4113609/49‑1 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 2:1939182/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:550276/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:2355659/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 2:3858344/1‑49 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAAT < 1:3797658/49‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:2934217/1‑50 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 2:4951764/1‑49 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:1901902/1‑49 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA < 1:805923/50‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 2:5695984/49‑1 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:3171787/1‑50 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTAC < 1:2656536/49‑1 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTAC < 2:2203231/49‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT < 2:1101258/50‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 2:5394410/1‑50 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT < 2:318865/50‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT < 2:2889214/50‑1 CTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT < 1:1462479/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:472826/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT < 2:3336606/49‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 2:854699/48‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:2880420/1‑50 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:1168654/50‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 2:1421780/50‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT > 1:2701469/1‑50 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 2:1786174/50‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:4974207/50‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 2:2434031/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 1:1795558/50‑1 cTTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 2:3295786/2‑50 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 2:78554/1‑49 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 2:3656477/49‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:1390293/49‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 2:212440/49‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 2:5364215/1‑49 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA > 1:2573752/1‑50 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA > 2:693040/1‑50 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCA < 1:688223/49‑1 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA < 1:322538/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 2:4839861/1‑50 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:4861901/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:202752/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 2:77419/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:5644740/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:4240041/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 2:4629731/49‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG < 1:3057681/50‑1 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:2943802/1‑50 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 2:1866991/1‑50 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 2:5088487/1‑49 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:2593417/1‑49 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 2:5666813/1‑49 TTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > 2:4034049/1‑50 TTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > 1:4278612/1‑50 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |