| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,872,030 | Δ1,437 bp | [dgcJ] | [dgcJ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1872030 | 1873466 | 1437 | 184 [0] | [0] 188 | [dgcJ] | [dgcJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1872029 | 0 (0.000) | 180 (1.230) | 74/96 | 0.0 | 100% | intergenic (+169/‑12) | cdgI/dgcJ | putative c‑di‑GMP binding protein CdgI/putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1873467 = | 0 (0.000) | coding (1427/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
Only 100 of 184 total aligned reads displayed.
AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1871980‑1872029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAA > NC_000913/1873467‑1873515 GCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGAT < 1:3435135/50‑1 GCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGAT < 2:1937418/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG < 2:1496354/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG < 2:3655301/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG > 2:2318455/1‑50 CAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:2414329/1‑49 CAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:4766065/1‑49 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:3725966/1‑50 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:1263814/1‑50 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA < 2:5164602/50‑1 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:4268300/1‑50 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:2848421/1‑50 ATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTAT < 1:3761284/50‑1 TCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTAT > 2:3766160/1‑49 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAA < 2:2738192/50‑1 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATA > 1:3906249/1‑48 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATA > 1:5656015/1‑48 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG > 1:2635503/1‑50 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG < 2:2163930/50‑1 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG < 2:4897518/50‑1 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG > 1:4146053/1‑50 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG > 1:1085370/1‑50 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG < 2:1219154/50‑1 AACTTTATCTGGGTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG > 1:4859457/1‑50 ACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGC < 1:2165364/50‑1 ACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGC > 1:2022822/1‑50 ACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGC > 1:619450/1‑50 CTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCT > 2:1137404/1‑50 CTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCT > 2:4366096/1‑50 TATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTC < 1:3319789/49‑1 TATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTC < 1:4544845/49‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 1:4509214/49‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 2:4509114/49‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 2:1864703/49‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 2:138355/49‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATACGTATAAAGCTTCC > 2:1411041/1‑49 CTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT > 2:839122/1‑50 GGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT > 2:3894927/1‑48 GGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT > 1:4246840/1‑48 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTTTAAAGCTTCCGAT < 2:4250438/47‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAG < 1:1433691/50‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGA < 1:967831/49‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGA < 1:667511/49‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGA < 2:2963450/49‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGA < 2:1658641/49‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT < 2:592384/47‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT < 1:1183639/47‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGA < 1:737680/46‑1 TTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGC < 2:1844540/50‑1 TTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGC > 1:1035630/1‑50 TTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGC > 1:857395/1‑50 TTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAG < 2:4081544/49‑1 TTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG > 2:2238350/1‑50 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGT > 1:1053220/1‑50 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG < 1:3356536/49‑1 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG < 2:444710/49‑1 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATCAGCGT > 2:364064/1‑50 TCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGT < 1:2764199/49‑1 CGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTA > 2:4718815/1‑49 gaTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA > 1:4994726/3‑50 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA > 2:924543/1‑50 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA > 2:507128/1‑50 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA > 1:550696/1‑50 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA > 1:920002/1‑50 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTA < 2:4267029/48‑1 TTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATAT > 2:1050611/1‑50 TTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATG > 1:5457706/1‑50 TTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATG > 1:2909631/1‑50 TCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATG < 1:2468493/49‑1 TCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATG < 2:1256895/49‑1 CACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGT > 2:3827223/1‑49 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCA < 1:146991/50‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCA < 2:4586203/50‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCA < 1:2921635/50‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC < 2:3394496/49‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC > 2:1158900/1‑49 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC < 2:814767/49‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC > 1:5075730/1‑49 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC < 1:3974054/49‑1 TAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA > 1:520566/1‑49 TAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA > 2:5353666/1‑49 AACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT > 2:714304/1‑49 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAA < 2:4703338/50‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAA < 1:1584676/50‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT < 1:4801537/48‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT < 2:4990491/48‑1 CCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:4461699/1‑50 CCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGGCAATAAG < 2:24379/50‑1 CGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGC < 1:5164479/50‑1 CGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:4920717/1‑49 GAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCA < 1:228299/50‑1 GAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:1749588/1‑48 AAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAG < 1:3118344/50‑1 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAG > 2:325078/1‑49 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAG > 1:226118/1‑49 GGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAA > 1:1537164/1‑50 GAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAAC < 1:4361405/50‑1 GATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAA < 2:3579928/50‑1 GATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAA < 2:2449327/50‑1 GATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA > 2:5515313/1‑49 AGGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1871980‑1872029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAA > NC_000913/1873467‑1873515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |