| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 200 [0] | [0] 202 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 199 (1.330) | 83/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
Only 100 of 199 total aligned reads displayed.
AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 1:2432896/1‑50AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 2:258933/1‑50AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA > 2:4402433/1‑50 GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATC < 2:3228921/50‑1 GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATC < 2:5051032/50‑1 CATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCC > 2:3016601/1‑50 ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT > 1:2469397/1‑50 ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT > 2:3843218/1‑50 ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT > 1:5123736/1‑50 TCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTG < 1:1912991/50‑1 TCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTG < 2:2957855/50‑1 CAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT > 1:1436853/1‑50 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 2:4426543/50‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC < 1:3643542/50‑1 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT < 2:4925887/49‑1 GAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCG < 2:476538/50‑1 AAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGT < 1:1381093/50‑1 AAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTT > 1:2901022/1‑50 AAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTT > 2:578690/1‑50 AATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT < 2:2890323/50‑1 AATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT > 2:4133615/1‑50 AATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT < 1:5670091/50‑1 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG < 1:3202400/50‑1 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG < 1:1021842/50‑1 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGT < 1:3881765/50‑1 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGT > 1:2163806/1‑50 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:4584801/49‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:4771104/49‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 1:3083461/49‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTT < 2:3255996/49‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:1004704/50‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT > 1:3991145/1‑50 TCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 2:2342734/1‑50 TCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 2:2398928/1‑50 TCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:4536977/1‑50 CATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 2:254126/1‑49 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:490185/1‑50 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA < 2:2179517/50‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:4449178/48‑1 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT < 1:994944/50‑1 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT < 1:3024077/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 2:5068204/1‑50 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 2:2050625/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT < 2:1130041/50‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT < 1:2337167/49‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT < 1:1098144/49‑1 TTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC > 1:2695071/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA > 1:3298334/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA < 2:1665885/49‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCA > 2:1428681/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC < 1:5496243/48‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC < 1:5632708/48‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC < 1:2580804/48‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA < 2:2090969/49‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 2:2923339/50‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:719359/50‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 2:192094/50‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 2:131043/1‑50 TCGGTAAACAGCCCCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAAT < 2:4591102/50‑1 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:959421/1‑49 CGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA > 1:211477/1‑50 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT < 1:1861903/50‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT < 2:277777/50‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 2:3935447/49‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATA < 2:3794043/50‑1 AAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 1:5539283/1‑50 AAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 2:4663461/1‑50 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG < 1:1246801/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG < 2:4823796/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 1:3423432/1‑49 ACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA < 1:1322022/50‑1 ACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA < 2:1706114/50‑1 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAA < 2:1990037/50‑1 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAA < 2:2188249/50‑1 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAA < 1:3713304/50‑1 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA > 1:2828979/1‑49 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA > 2:2140050/1‑49 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA > 1:3323252/1‑50 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA > 1:4829131/1‑50 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA > 2:4618352/1‑50 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT < 1:2255320/50‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATT < 1:774538/50‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATT < 1:2764183/50‑1 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA > 1:2988384/1‑50 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA < 1:3815975/50‑1 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA > 2:2280869/1‑50 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT > 2:904970/1‑50 CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT < 1:4674016/50‑1 TTAGAATCCTGTCGTATGTTTTCGATTTCAAAATATAATGAAATTATTTG > 2:432691/1‑50 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT > 1:1552395/1‑50 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG < 1:4451408/49‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:2779354/48‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:3182265/48‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:118784/48‑1 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT > 1:1027145/1‑50 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT < 2:5376706/50‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT > 2:3076425/1‑50 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT < 1:860954/49‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT < 2:5279971/49‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT < 2:5535883/49‑1 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |