| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 74 (0.640) +CGAGATGGACG |
46/76 | 0.1 | 53.8% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 624576 = | 165 (1.110) | intergenic (‑66/‑309) | fepB/entC | ferric enterobactin ABC transporter periplasmic binding protein/isochorismate synthase EntC | |||||
Only 100 of 247 total aligned reads displayed.
ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 | atttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgg > 2:515224‑M2/50‑50 (MQ=255) tttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGt > 1:2588533‑M2/49‑50 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt < 1:1520376/50‑1 (MQ=255) ttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGTc > 2:2333344‑M2/48‑50 (MQ=255) taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 2:4035547/1‑50 (MQ=255) tccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGTc < 2:383549‑M2/3‑1 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc > 2:2817424/1‑50 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc > 2:555586/1‑50 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc < 1:1191533/49‑1 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc < 1:4526583/49‑1 (MQ=255) ccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGTccc > 2:940175‑M2/46‑50 (MQ=255) ccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGTcc < 2:1237207‑M2/4‑1 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc < 2:4869181/50‑1 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc > 2:1721440/1‑50 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc > 1:1982872/1‑50 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc < 1:899725/50‑1 (MQ=255) taaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcccc > 1:1497230/1‑50 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatggacgGTcccc > 2:617112‑M2/45‑50 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCt < 2:2933293‑M2/7‑1 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCt > 1:1141734‑M2/44‑50 (MQ=255) aaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCt > 1:4190362/1‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 1:2200529‑M2/8‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc > 1:4398069‑M2/43‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 2:4486522‑M2/8‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 1:4863374/50‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 2:2035215/50‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 2:3214286/50‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc > 2:3465616/1‑50 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 1:1777969/50‑1 (MQ=255) gtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCg < 2:2831155‑M2/9‑1 (MQ=255) gtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCg > 1:3555280‑M2/42‑50 (MQ=255) ggTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCg > 2:247410/1‑50 (MQ=255) ggTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCg < 1:1862615/50‑1 (MQ=255) gTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGc > 2:5008992/1‑50 (MQ=255) cagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGcc > 2:4217099‑M2/40‑50 (MQ=255) gacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGcccc < 2:2743206‑M2/13‑1 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcccc > 2:5497732/1‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcccc > 1:1670714/1‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGccc < 1:515200/49‑1 (MQ=255) aGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCt > 2:4570526/1‑50 (MQ=255) aGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCt > 2:2209454/1‑50 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt > 2:5298204/1‑50 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt > 1:2627896/1‑50 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt > 1:3124498/1‑50 (MQ=255) gggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCctt > 2:4977580‑M2/35‑50 (MQ=255) gggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCctt < 2:3776460‑M2/16‑1 (MQ=255) ggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCttt < 1:3084165/50‑1 (MQ=255) cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgg < 1:749859/50‑1 (MQ=255) cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgg > 2:1093374/1‑50 (MQ=255) gTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:3534100/1‑50 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgggg < 1:2018711/50‑1 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 2:696900/1‑49 (MQ=255) gcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTggg > 1:4690631‑M2/30‑48 (MQ=255) aaTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:222673/1‑48 (MQ=255) aaTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 2:2629934/1‑48 (MQ=255) aaTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:1234361/1‑48 (MQ=255) caagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTggg > 1:1597928‑M2/29‑47 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:2800265/1‑47 (MQ=255) gACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGagag > 1:675031/1‑50 (MQ=255) agttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGagag < 1:2386790‑M2/24‑1 (MQ=255) gttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAgg < 1:3925886‑M2/25‑1 (MQ=255) aCAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAgg > 2:4233857/1‑50 (MQ=255) ttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAggg > 1:4729182‑M2/25‑50 (MQ=255) cAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAggg > 2:3339614/1‑50 (MQ=255) tgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGt > 2:3025267‑M2/24‑50 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 2:4714234/1‑50 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt < 1:3248678/50‑1 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:3453400/1‑50 (MQ=255) gcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGt < 2:201424‑M2/27‑1 (MQ=255) aaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 2:3138480/1‑49 (MQ=255) cagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGtt < 1:5610552‑M2/28‑1 (MQ=255) agaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAg > 1:4586456‑M2/21‑50 (MQ=255) tCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 2:791712/1‑50 (MQ=255) gaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg < 2:2555896‑M2/31‑1 (MQ=255) cGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg > 2:1643685/1‑50 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 2:2868052/1‑50 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 2:1529370/1‑50 (MQ=255) ccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt < 1:496958‑M2/33‑1 (MQ=255) aCAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 2:1892123/1‑49 (MQ=255) gttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGa < 2:1162179‑M2/35‑1 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 2:5188236/1‑48 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 2:411649/1‑48 (MQ=255) aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAg > 2:5631607/1‑50 (MQ=255) aaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgg > 1:5334534/1‑50 (MQ=255) aaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgg > 1:299398/1‑50 (MQ=255) aaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgg > 1:3747701/1‑50 (MQ=255) acgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgg < 2:4846974‑M2/37‑1 (MQ=255) aGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg < 1:1361984/50‑1 (MQ=255) aGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg > 1:1006155/1‑50 (MQ=255) gcgcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgggg < 2:63842/50‑1 (MQ=255) cgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAggg < 2:3122600‑M2/38‑1 (MQ=255) gcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:106263/1‑50 (MQ=255) gcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:1263970/1‑50 (MQ=255) cacaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:334031/1‑49 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAca < 1:3406813/50‑1 (MQ=255) aTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 2:3628423/1‑49 (MQ=255) aTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 2:839324/1‑49 (MQ=255) tCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 2:1852238/1‑48 (MQ=40) cGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccag > 1:5413341/1‑49 (MQ=255) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCa > 2:1344808/1‑50 (MQ=255) | ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |