| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 508,873 | Δ40,744 bp | copA–[ylbE] | 37 genes copA, copA, copA, glsA, ybaT, cueR, ybbJ, qmcA, fetA, fetB, cnoX, ybbO, tesA, ybbA, ybbP, rhsD, ybbC, ylbH, ybbD, ylbI, ylbG, selU, allS, allA, allR, gcl, hyi, glxR, ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, [ylbE] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 508873 | 549616 | 40744 | 106 [0] | [0] 102 | copA–[ylbE] | copA,copA,copA,glsA,ybaT,cueR,ybbJ,qmcA,fetA,fetB,cnoX,ybbO,tesA,ybbA,ybbP,rhsD,ybbC,ylbH,ybbD,ylbI,ylbG,selU,allS,allA,allR,gcl,hyi,glxR,ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,[ylbE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 0 (0.000) | 102 (0.680) | 57/98 | 0.1 | 100% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 0 (0.000) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
Only 100 of 106 total aligned reads displayed.
TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCAC > NC_000913/508823‑508919 | tGCGTCGATGCCAACTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt > 2:3284624/1‑50 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 2:1333222/50‑1 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt < 1:1148983/50‑1 (MQ=255)tGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGt > 2:5196138/1‑50 (MQ=255) gCGACGACGCCAAATGCGCCACCCTAAAGCAGCGTATCCGCAAGGATGTg > 2:2078329‑M1/1‑49 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgg < 1:2544045‑M1/50‑3 (MQ=255) cGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTg < 2:5399593‑M1/49‑2 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgga < 2:821992‑M1/50‑4 (MQ=255) gTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTgga < 2:5562567‑M1/50‑4 (MQ=255) tCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaa < 2:5243439‑M1/50‑5 (MQ=255) cGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac > 2:4494812‑M1/1‑45 (MQ=255) cGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac > 1:2815093‑M1/1‑45 (MQ=255) cGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac > 1:2122336‑M1/1‑45 (MQ=255) cGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac > 1:2440237‑M1/1‑45 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg > 1:5590142‑M1/1‑44 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg < 2:5284541‑M1/50‑7 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg > 2:4393634‑M1/1‑44 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg > 1:2175644‑M1/1‑44 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacg > 1:4971133‑M1/1‑44 (MQ=255) gATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaac < 2:134989‑M1/49‑6 (MQ=255) aTGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgc < 1:1682888‑M1/50‑8 (MQ=255) ccAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgc < 1:1984068‑M1/49‑10 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa > 2:4038018‑M1/1‑39 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa > 1:3947727‑M1/1‑39 (MQ=255) cAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaa < 2:1828152‑M1/50‑12 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat < 1:2508979‑M1/50‑13 (MQ=255) aaaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat < 1:2929593‑M1/50‑13 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatg < 1:1594746‑M1/50‑14 (MQ=255) aaTGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaat > 2:2523266‑M1/1‑37 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac < 1:2805151‑M1/50‑16 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac < 1:4637551‑M1/50‑16 (MQ=255) tGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgac < 1:2979547‑M1/50‑16 (MQ=255) cgcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacga < 2:2327803‑M1/50‑18 (MQ=255) gcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat < 1:696900‑M1/50‑19 (MQ=255) gcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat > 1:1366280‑M1/1‑32 (MQ=255) gcCACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgat < 1:4314780‑M1/50‑19 (MQ=255) gcCACCCTAAAGCAGCGCAACCGCAATGATGTggaacgcgcaatgacgat > 2:3045597‑M1/1‑32 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaattacgatc < 1:3099138‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 2:3783578‑M1/50‑20 (MQ=255) ccACCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatc < 1:401525‑M1/50‑20 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat > 1:2937232‑M1/1‑29 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat < 1:3184775‑M1/50‑22 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat < 2:740606‑M1/50‑22 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat < 1:1531682‑M1/50‑22 (MQ=255) aCCCTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcat < 2:288869‑M1/50‑22 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 2:4565576‑M1/1‑28 (MQ=255) cccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 1:4171488‑M1/1‑28 (MQ=255) ccTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatc > 2:332508‑M1/1‑27 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca < 1:652556‑M1/50‑25 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca < 1:1523497‑M1/50‑25 (MQ=255) cTAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatcca < 1:1388796‑M1/50‑25 (MQ=255) tAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccat > 1:4115860‑M1/1‑25 (MQ=255) tAAAGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccat > 1:1598836‑M1/1‑25 (MQ=255) aaaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatc > 1:145823‑M1/1‑24 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc > 2:5040433‑M1/1‑23 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc > 1:2026887‑M1/1‑23 (MQ=255) aaGCAGCGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcc > 1:1287736‑M1/1‑23 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct < 1:4572164‑M1/50‑29 (MQ=255) agcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcct < 1:2866547‑M1/50‑29 (MQ=255) gcagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctc < 1:3859722‑M1/50‑30 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:4922032‑M1/50‑31 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct > 2:269050‑M1/1‑20 (MQ=255) cagcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctct < 1:3184742‑M1/50‑31 (MQ=255) agcGCATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctg < 1:2864163‑M1/50‑32 (MQ=255) gcgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgc < 2:62446‑M1/50‑33 (MQ=255) gcgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgc < 1:3077471‑M1/50‑33 (MQ=255) gcgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgc > 2:356340‑M1/1‑18 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct > 2:154711‑M1/1‑17 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct > 1:2376616‑M1/1‑17 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct < 1:3101532‑M1/50‑34 (MQ=255) cgcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgct > 1:999283‑M1/1‑17 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt > 1:935433‑M1/1‑16 (MQ=255) gcATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgctt < 1:1936054‑M1/50‑35 (MQ=255) cATCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttg > 1:372920‑M1/1‑15 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:1685232‑M1/1‑14 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 2:313897‑M1/1‑14 (MQ=255) aTCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:3094409‑M1/1‑14 (MQ=255) tCCGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgc > 1:4148923‑M1/1‑13 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:1324127‑M1/1‑11 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcca < 2:4016528‑M1/49‑39 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcca < 1:312992‑M1/49‑39 (MQ=255) cGCAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgcca < 2:457627‑M1/49‑39 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagta < 1:1847807‑M1/50‑42 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 1:4047878‑M1/1‑9 (MQ=255) cAATGATGTggaacgcgcaatgacgatcatccatcctctgcttgccag > 2:5368603‑M1/1‑9 (MQ=255) aaTGATGTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:805745‑M1/1‑8 (MQ=255) atgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagt < 2:422999‑M1/50‑44 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagta < 2:2306581‑M1/50‑45 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 2:687410‑M1/1‑6 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 2:87123‑M1/1‑6 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:1967429‑M1/1‑6 (MQ=255) tgatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtag > 1:3974948‑M1/1‑6 (MQ=255) gatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag > 1:898401‑M1/1‑5 (MQ=255) gatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag > 1:4223336‑M1/1‑5 (MQ=255) gatgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag > 2:27209‑M1/1‑5 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagc > 1:5063534‑M1/1‑4 (MQ=255) atgTggaacgcgcaatgacgatcatccatcctctgcttgccagtagtag < 2:2492519‑M1/49‑46 (MQ=255) tgtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg < 2:539444‑M1/50‑48 (MQ=255) tgtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg < 2:2085202‑M1/50‑48 (MQ=255) gtggaacgcgcaatgacgatcatccatcctctgcttgccagtagtagcg > 1:5535615‑M1/1‑2 (MQ=255) | TGCGTCGATGCCAAATGCGCCACCCTAAAGCAGCGCATCCGCAATGATGTACTTATTCCTTCGGTTTAAACCGCAGCAACCGGTTGGCGTTACTCAC > NC_000913/508823‑508919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |