| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 128 [0] | [0] 128 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 124 (0.830) | 65/98 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
Only 100 of 128 total aligned reads displayed.
TTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCGT > NC_000913/2509581‑2509679 | tttGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa > 1:3685046/1‑50 (MQ=255) ttGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa < 1:73408/49‑1 (MQ=255) ttGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa < 1:4312115/49‑1 (MQ=255) ttGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa > 2:1475846/1‑49 (MQ=255) tGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAc < 1:5391399‑M1/49‑2 (MQ=255) gCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag > 2:2379318‑M1/1‑47 (MQ=255) gCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAca < 1:5303164‑M1/49‑3 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg < 1:1127229‑M1/50‑5 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg > 1:3252880‑M1/1‑46 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg < 1:771085‑M1/50‑5 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 2:3423636‑M1/49‑4 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 1:2035846‑M1/49‑4 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 2:4512651‑M1/49‑4 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 2:2135779‑M1/49‑4 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 2:3770942‑M1/49‑4 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 1:1326741‑M1/49‑4 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 1:1105003‑M1/49‑4 (MQ=255) aaGCTGGGCAAACTAAGTATCTGACCCCGTATAAGGAATAGAACAcaggc < 1:908955‑M1/50‑6 (MQ=255) aGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcg > 2:3418356‑M1/1‑44 (MQ=255) aGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcg < 1:4442674‑M1/50‑7 (MQ=255) aGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcg < 2:3334762‑M1/50‑7 (MQ=255) aGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcg < 2:4294192‑M1/50‑7 (MQ=255) gCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg > 2:3833828‑M1/1‑43 (MQ=255) gCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg > 2:2212680‑M1/1‑43 (MQ=255) gCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg < 1:5138094‑M1/50‑8 (MQ=255) cTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggc < 2:3116755‑M1/50‑9 (MQ=255) cTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg > 1:4959885‑M1/1‑42 (MQ=255) cTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg > 2:4149617‑M1/1‑42 (MQ=255) tGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggca > 2:3294237‑M1/1‑41 (MQ=255) tGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggca > 1:3584593‑M1/1‑41 (MQ=255) tGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggca > 2:4937160‑M1/1‑41 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAATGAATAGAACAcaggcggcac > 2:2276113‑M1/1‑39 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcac > 2:5367571‑M1/1‑39 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcac < 2:1232897‑M1/49‑11 (MQ=255) gCAAACTAAGTATATGCCCCCGCATAAGGAATAGAACAaaggcggcactc < 2:5320412‑M1/50‑13 (MQ=255) cAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaa < 1:5697350‑M1/50‑14 (MQ=255) cAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaa > 2:4154310‑M1/1‑37 (MQ=255) cAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaa < 1:3562004‑M1/50‑14 (MQ=255) aaaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaac > 2:3040529‑M1/1‑36 (MQ=255) aaaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaac > 2:1547665‑M1/1‑36 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc < 2:1717864‑M1/50‑16 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc < 1:2427452‑M1/50‑16 (MQ=255) aCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaaccc < 2:3258641‑M1/50‑17 (MQ=255) cTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg < 2:1060480‑M1/50‑18 (MQ=255) cTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg < 2:5076629‑M1/50‑18 (MQ=255) tAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg > 1:4178659‑M1/1‑32 (MQ=255) aaGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccgga > 1:3939928‑M1/1‑31 (MQ=255) aaGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccgga > 1:3921587‑M1/1‑31 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac < 1:2814895‑M1/50‑21 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac < 1:1943472‑M1/50‑21 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac > 1:2315266‑M1/1‑30 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac > 2:342040‑M1/1‑30 (MQ=255) tATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 2:3762074‑M1/1‑28 (MQ=255) tCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 2:1003689‑M1/1‑26 (MQ=255) gACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact > 2:5275675‑M1/1‑23 (MQ=255) gACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact > 2:546686‑M1/1‑23 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtaga < 1:3248382‑M1/47‑26 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtag < 2:4591284‑M1/46‑25 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtag < 2:4353215‑M1/46‑25 (MQ=255) cccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgta < 1:4194819‑M1/50‑31 (MQ=255) cccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagacggta < 2:4721789‑M1/50‑31 (MQ=255) ccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat > 1:479414‑M1/1‑19 (MQ=255) ccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat < 1:2754838‑M1/50‑32 (MQ=255) ccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat > 2:5370464‑M1/1‑19 (MQ=255) ccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat < 2:2242219‑M1/50‑32 (MQ=255) ccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat > 1:1607585‑M1/1‑19 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatt < 2:1125922‑M1/50‑33 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatt < 1:730193‑M1/50‑33 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatt < 2:1217239‑M1/50‑33 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatt < 2:1671624‑M1/50‑33 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat > 2:2925217‑M1/1‑18 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta < 1:4685600‑M1/50‑34 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta > 1:2555110‑M1/1‑17 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta > 1:2359032‑M1/1‑17 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta < 1:2251293‑M1/50‑34 (MQ=255) cATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta > 2:2599823‑M1/1‑16 (MQ=255) aTAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattaca < 1:2639597‑M1/50‑36 (MQ=255) aTAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattac > 1:3526930‑M1/1‑15 (MQ=255) tAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaa < 2:1755467‑M1/50‑37 (MQ=255) tAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattaca > 1:3056733‑M1/1‑14 (MQ=255) tAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattaca > 1:3968461‑M1/1‑14 (MQ=255) tAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattaaaa < 1:5519893‑M1/50‑37 (MQ=255) aaGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaa > 2:458530‑M1/1‑13 (MQ=255) aGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaa > 2:814464‑M1/1‑12 (MQ=255) aGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaa > 2:169426‑M1/1‑12 (MQ=255) ggAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaag > 1:3817128‑M1/1‑11 (MQ=255) ggAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaag > 1:231025‑M1/1‑11 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc < 1:46041‑M1/50‑41 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc > 2:3840992‑M1/1‑10 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc > 1:5055271‑M1/1‑10 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc < 2:316828‑M1/50‑41 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc < 1:1228698‑M1/50‑41 (MQ=255) aTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcgg > 1:1815644‑M1/1‑8 (MQ=255) tAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcggc < 1:3659053‑M1/50‑44 (MQ=255) gAACAcaggcggcactaacccggacgtagactgtattacaaaagcggca < 2:1757482‑M1/49‑45 (MQ=255) aaCAcaggcggcactaacccggacgtagactgtattacaaaagcggcaaa < 2:2490537‑M1/50‑47 (MQ=255) acacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaa < 1:4976167‑M1/50‑48 (MQ=255) acaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaag > 2:1168839‑M1/1‑1 (MQ=255) acaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaag > 2:5493217‑M1/1‑1 (MQ=255) acaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaag < 2:2752012‑M1/50‑50 (MQ=255) | TTTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCGT > NC_000913/2509581‑2509679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |