| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 128 [0] | [0] 128 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 124 (0.830) | 65/98 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
Only 100 of 128 total aligned reads displayed.
AACAGGGGGCCAGCCTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGC > NC_000913/2517902‑2517999 | tgcaagctgggcaaactaagtatctgaccccgcataaggaatagaacac < 1:5391399‑M2/1‑1 (MQ=255)tgcaagctgggcaaactaagtatctgaccccgcataaggaatagaacac < 2:3997170‑M2/1‑1 (MQ=255)tgcaagctgggcaaactaagtatctgaccccgcataaggaatagaacac < 1:3150476‑M2/1‑1 (MQ=255) gcaagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAg > 2:2379318‑M2/48‑50 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAgg < 1:1127229‑M2/4‑1 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAgg < 1:771085‑M2/4‑1 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAgg > 1:3252880‑M2/47‑50 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAg < 1:1105003‑M2/3‑1 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAg < 2:2135779‑M2/3‑1 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAg < 2:1341049‑M2/3‑1 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAg < 2:3423636‑M2/3‑1 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAg < 2:3770942‑M2/3‑1 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAg < 2:4512651‑M2/3‑1 (MQ=255) aagctgggcaaactaagtatctgaccccgtataaggaatagaacaCAggc < 1:908955‑M2/5‑1 (MQ=255) aagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggc > 2:3333256‑M2/46‑50 (MQ=255) agctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcg < 2:4294192‑M2/6‑1 (MQ=255) agctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcg < 1:4442674‑M2/6‑1 (MQ=255) agctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcg > 2:3418356‑M2/45‑50 (MQ=255) gctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg < 1:5138094‑M2/7‑1 (MQ=255) gctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg > 2:2212680‑M2/44‑50 (MQ=255) gctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg > 2:3833828‑M2/44‑50 (MQ=255) ctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcggc < 2:3116755‑M2/8‑1 (MQ=255) ctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg > 1:151129‑M2/43‑49 (MQ=255) ctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg > 2:1093282‑M2/43‑49 (MQ=255) tgggcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCa > 1:3584593‑M2/42‑50 (MQ=255) tgggcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCa > 2:4937160‑M2/42‑50 (MQ=255) tgggcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCa > 2:3294237‑M2/42‑50 (MQ=255) ggcaaactaagtatctgaccccgcataatgaatagaacaCAGGCGGCAc > 2:2276113‑M2/40‑49 (MQ=255) ggcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCAc < 2:1232897‑M2/10‑1 (MQ=255) ggcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCAc > 2:5367571‑M2/40‑49 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACt > 2:4350419‑M2/39‑49 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTa < 2:1708195‑M2/12‑1 (MQ=255) gcaaactaagtatatgcccccgcataaggaatagaacaAAGGCGGCActc < 2:5320412‑M2/12‑2 (MQ=255) caaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTaa > 2:4154310‑M2/38‑50 (MQ=255) aaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAc > 2:1547665‑M2/37‑50 (MQ=255) aactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:2427452‑M2/15‑1 (MQ=255) aactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc < 2:1717864‑M2/15‑1 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc > 1:528817‑M2/35‑50 (MQ=255) ctaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg < 2:1060480‑M2/17‑1 (MQ=255) ctaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg < 2:5076629‑M2/17‑1 (MQ=255) ctaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg < 1:2677257‑M2/17‑1 (MQ=255) taagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:4178659‑M2/33‑49 (MQ=255) aagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGa > 1:3921587‑M2/32‑50 (MQ=255) aagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGa > 1:3939928‑M2/32‑50 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:1943472‑M2/20‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 2:1969064‑M2/20‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:2814895‑M2/20‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc > 2:342040‑M2/31‑50 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:4548961‑M2/27‑47 (MQ=255) ctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGa > 1:3582538‑M2/26‑50 (MQ=255) gaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACt > 1:2319359‑M2/24‑50 (MQ=255) gaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACt > 2:5275675‑M2/24‑50 (MQ=255) gaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACt > 2:546686‑M2/24‑50 (MQ=255) accccgcataaggaatagaacaCAGGCGGCGCTAACCCGGACGTAGACTg > 1:2038141‑M2/23‑50 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAg < 2:4591284‑M2/24‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGa < 1:3248382‑M2/25‑1 (MQ=255) ccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGt < 2:3484013‑M2/29‑1 (MQ=255) cccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTa < 1:4194819‑M2/30‑1 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:479414‑M2/20‑50 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:1607585‑M2/20‑50 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 2:5370464‑M2/20‑50 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:2754838‑M2/31‑1 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAtt < 2:1217239‑M2/32‑1 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAtt < 2:1125922‑M2/32‑1 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAtt < 1:730193‑M2/32‑1 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 2:2925217‑M2/19‑49 (MQ=255) gcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa < 1:4685600‑M2/33‑1 (MQ=255) gcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa < 1:2251293‑M2/33‑1 (MQ=255) gcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 2:3160125‑M2/18‑50 (MQ=255) gcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 1:2359032‑M2/18‑50 (MQ=255) gcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 1:2555110‑M2/18‑50 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 2:4643374‑M2/17‑49 (MQ=255) ataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc > 1:3526930‑M2/16‑49 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTaaaa < 1:5519893‑M2/36‑1 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa < 2:1755467‑M2/36‑1 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa < 1:783740‑M2/36‑1 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACa > 1:3968461‑M2/15‑49 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACa > 1:4840616‑M2/15‑49 (MQ=255) aaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa > 2:458530‑M2/14‑49 (MQ=255) aaggaatagaaaaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa > 2:2290509‑M2/14‑49 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa > 2:169426‑M2/13‑48 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa > 2:814464‑M2/13‑48 (MQ=255) ggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAg > 1:231025‑M2/12‑50 (MQ=255) ggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAg > 1:3817128‑M2/12‑50 (MQ=255) gaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGc < 1:1228698‑M2/40‑1 (MQ=255) gaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGc > 2:3840992‑M2/11‑50 (MQ=255) gaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGc > 1:5055271‑M2/11‑50 (MQ=255) gaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGc < 2:316828‑M2/40‑1 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCgg > 1:1815644‑M2/9‑50 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCgg > 1:5626058‑M2/8‑49 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGc < 1:3659053‑M2/43‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaa < 2:2490537‑M2/46‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaa > 2:2676949‑M2/5‑49 (MQ=255) acaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaaa < 1:4976167‑M2/47‑1 (MQ=255) aCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAg < 2:2752012‑M2/49‑1 (MQ=255) aCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAg > 2:5493217‑M2/2‑50 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAg > 1:100495/1‑49 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAg > 2:3301031/1‑49 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGc < 2:5059744/50‑1 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGc < 2:3078340/50‑1 (MQ=255) | AACAGGGGGCCAGCCTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGC > NC_000913/2517902‑2517999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |