| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 92,854 | (GCG)4→3 | coding (1442‑1444/1767 nt) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 92844 | 92846 | 3 | 26 [0] | [0] 27 | ftsI | peptidoglycan DD‑transpeptidase FtsI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 92847 = | 0 (0.000) | 24 (1.010) | 23/78 | 0.0 | 100% | coding (1435/1767 nt) | ftsI | peptidoglycan DD‑transpeptidase FtsI |
| ? | NC_000913 | = 92843 | 0 (0.000) | coding (1431/1767 nt) | ftsI | peptidoglycan DD‑transpeptidase FtsI | |||||
CATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTA > NC_000913/92798‑92892 | cATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggc > 1:1320319‑M2/1‑46 (MQ=255) ttGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggc > 1:154152‑M2/1‑44 (MQ=255) gCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcggcgtg > 1:1655115‑M2/1‑38 (MQ=255) cACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcggcgtg < 1:1927075‑M2/49‑13 (MQ=255) gtgCATATGATGGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcgg > 1:1470850‑M2/1‑30 (MQ=255) tgCATATGATGGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggc < 1:1041724‑M2/49‑21 (MQ=255) cATATGATGGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgat < 1:187021‑M2/50‑24 (MQ=255) atatGATGGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgatt > 1:611741‑M2/1‑26 (MQ=255) atatGATGGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgatt > 1:1873132‑M2/1‑26 (MQ=255) atatGATGGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgat < 1:478064‑M2/49‑24 (MQ=255) tatGATGGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgatt < 1:276402‑M2/49‑25 (MQ=255) tgatgGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgattaaa > 1:986665‑M2/1‑23 (MQ=255) tgatgGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgattaa > 1:1243900‑M2/1‑23 (MQ=255) atgGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgattaaag > 1:643415‑M2/1‑21 (MQ=255) tgGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgattaaaggc > 1:1063927‑M2/1‑20 (MQ=255) aaaGCGTGGCGCTACCAggcggcggcgtgaaggcggcgattaaaggctat < 1:1735112‑M2/50‑34 (MQ=255) aGCGTGGCGCTACCAggcggcggcgtgaaggcggcgattaaaggctatcg > 1:1459949‑M2/1‑15 (MQ=255) gCGTGGCGCTACCAggcggcggcgtgaaggcggcgattaaaggctatcg < 1:362642‑M2/49‑36 (MQ=255) gcgcTACCAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgc > 1:353181‑M2/1‑9 (MQ=255) cgcTACCAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgcc > 1:2136632‑M2/1‑8 (MQ=255) cTACCAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgccat > 1:523673‑M2/1‑6 (MQ=255) aCCAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgccatt < 1:2065756‑M2/49‑46 (MQ=255) ccAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgccattaa > 1:94321‑M2/1‑3 (MQ=255) ccAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgccatt > 1:1566523‑M2/1‑3 (MQ=255) cAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgccattaa < 1:1873678‑M2/49‑48 (MQ=255) aggcggcggcgtgaaggcggcgattaaaggctatcgtatcgccattaaaa < 1:621840‑M2/50‑50 (MQ=255) | CATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTA > NC_000913/92798‑92892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |