| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 29 [0] | [0] 29 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 27 (0.900) | 23/98 | 0.1 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAA > NC_000913/167434‑167528 | ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa < 1:1164070/50‑1 (MQ=255)ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa < 1:1428199/50‑1 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:602813‑M1/1‑46 (MQ=255) cATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca > 1:1965786‑M1/1‑45 (MQ=255) ttCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 1:1920772‑M1/1‑43 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg > 1:2034387‑M1/1‑38 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac < 1:1830658‑M1/49‑12 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatata < 1:676686‑M1/47‑10 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatata < 1:1230760‑M1/47‑10 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 1:1456448‑M1/1‑37 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 1:1959950‑M1/1‑37 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggc < 1:625345‑M1/49‑15 (MQ=255) aCGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccc > 1:2201642‑M1/1‑34 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:540361‑M1/1‑31 (MQ=255) tATCATTCACTTTACATCAGAGATATACCAttccatataacggccctgta > 1:897479‑M1/1‑30 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:1831087‑M1/49‑22 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:1362911‑M1/49‑22 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct > 1:1705883‑M1/1‑25 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct < 1:1500503‑M1/50‑26 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:704119‑M1/1‑18 (MQ=255) aCATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:288724‑M1/1‑17 (MQ=255) aTCAGAGATATACCAttccatataacggccctgtacgcctggacggataa < 1:2094072‑M1/50‑36 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc < 1:1812992‑M1/50‑39 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc > 1:1149498‑M1/1‑12 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaag < 1:2121491‑M1/49‑38 (MQ=255) gagaTATACCAttccatataacggccctgtacgcctggacggataaagcg > 1:1449230‑M1/1‑11 (MQ=255) gagaTATACCAttccatataacggccctgtacgcctggacggataaagcg > 1:1130813‑M1/1‑11 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:668100‑M1/1‑8 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttacg > 1:395912‑M1/1‑5 (MQ=255) | ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAA > NC_000913/167434‑167528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |