| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 49 [0] | [0] 50 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 49 (1.310) | 37/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:314773/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:2395423/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1275352/1‑50 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:1929200/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1692686/1‑49 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:693083/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:745008/50‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:710117/50‑1 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:1190388/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:1472260/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:560261/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:734138/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:1155770/49‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:326160/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:1434060/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:2324366/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG > 1:2178806/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:1424584/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:79612/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:2529079/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:386472/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:1359119/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:208619/1‑49 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:822311/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:1688284/1‑50 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:1943769/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:854417/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:2082984/49‑1 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:410145/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 1:360876/1‑50 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT > 1:1372035/1‑50 TCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:1828355/1‑50 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:283749/1‑49 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA < 1:495500/50‑1 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:2319112/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:36191/1‑50 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA < 1:606347/50‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA < 1:159698/50‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:2218473/49‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:2195786/49‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:598383/1‑49 CAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:2017384/1‑50 CAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:797677/1‑50 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:422850/1‑49 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:1091676/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG > 1:1933297/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:1167749/49‑1 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:769645/1‑50 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:1132325/1‑50 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |