| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 35 [0] | [0] 35 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 34 (0.910) | 29/98 | 0.1 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCGT > NC_000913/2509583‑2509679 | tGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa > 1:2624865/1‑48 (MQ=255)tGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAc < 1:2783601‑M1/49‑2 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 1:571426‑M1/49‑4 (MQ=255) aaGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggc < 1:319372‑M1/50‑6 (MQ=255) tGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggca > 1:239831‑M1/1‑41 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcact < 1:484268‑M1/50‑12 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcac > 1:1185651‑M1/1‑39 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcac < 1:2757845‑M1/49‑11 (MQ=255) aaaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaac < 1:1029688‑M1/50‑15 (MQ=255) aaaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaac > 1:212598‑M1/1‑36 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc > 1:1111146‑M1/1‑35 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc < 1:1429040‑M1/50‑16 (MQ=255) cTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg < 1:250048‑M1/50‑18 (MQ=255) aaGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccgga > 1:2785682‑M1/1‑31 (MQ=255) gTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 1:121201‑M1/1‑29 (MQ=255) tATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgt < 1:1867415‑M1/50‑23 (MQ=255) tCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 1:720430‑M1/1‑26 (MQ=255) tGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagac > 1:622747‑M1/1‑24 (MQ=255) tGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagac > 1:2711910‑M1/1‑24 (MQ=255) gACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact > 1:430376‑M1/1‑23 (MQ=255) ccccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgt < 1:2657249‑M1/50‑30 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatt < 1:375914‑M1/50‑33 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatt < 1:2530999‑M1/50‑33 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta < 1:1102194‑M1/50‑34 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta > 1:1749393‑M1/1‑17 (MQ=255) aTAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattaca < 1:426528‑M1/50‑36 (MQ=255) aTAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattaca < 1:705294‑M1/50‑36 (MQ=255) aaGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaa > 1:245001‑M1/1‑13 (MQ=255) aaGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaa > 1:801942‑M1/1‑13 (MQ=255) aaCAcaggcggcactaacccggacgtagactgtattacaaaagcggcaa > 1:311715‑M1/1‑4 (MQ=255) aaCAcaggcggcactaacccggacgtagactgtattacaaaagcggcaa > 1:146847‑M1/1‑4 (MQ=255) acacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaa < 1:2345909‑M1/50‑48 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaa > 1:2135483‑M1/1‑2 (MQ=255) acaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaag > 1:217701‑M1/1‑1 (MQ=255) acaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaag < 1:1143055‑M1/50‑50 (MQ=255) | TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCGT > NC_000913/2509583‑2509679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |