| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 37 [0] | [0] 37 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 36 (1.240) | 29/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729316‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > NC_000913/738963‑739009 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:1007781/50‑1AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:541044/50‑1 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:1764050/50‑1 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT > 1:1428664/1‑50 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:2691848/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:748686/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:475958/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:118671/1‑49 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC < 1:86447/50‑1 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC > 1:251170/1‑50 TGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 1:1774162/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:2217390/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:1417080/48‑1 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC < 1:211307/50‑1 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:800126/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:895679/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT < 1:810525/49‑1 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT < 1:552011/49‑1 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC < 1:1797898/50‑1 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:931112/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT < 1:74113/49‑1 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT < 1:1117579/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG < 1:2200217/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:1910006/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:738975/1‑49 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 1:48035/50‑1 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:86061/1‑50 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC > 1:1883037/1‑50 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGC < 1:2132818/50‑1 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:2057498/1‑49 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT > 1:1239177/1‑49 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:2508577/50‑1 ACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG > 1:103702/1‑49 ACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG > 1:2477754/1‑49 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGA < 1:1637216/49‑1 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCT < 1:540621/49‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:2389802/1‑49 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729316‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > NC_000913/738963‑739009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |