| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 37 [0] | [0] 37 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 36 (1.240) | 29/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > NC_000913/738914‑739009 | aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:1007781‑M2/1‑1 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:541044‑M2/1‑1 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg < 1:1764050‑M2/2‑1 (MQ=255) aggcaactggtgatttttattgattgctgagttttgaatacattgaaCGt > 1:1428664‑M2/48‑50 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTCt < 1:2691848‑M2/5‑1 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTac < 1:748686‑M2/7‑1 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTac < 1:475958‑M2/7‑1 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:118671‑M2/44‑49 (MQ=255) ctggtgatttttattgattgctgagttttgaatacattgaaCGTCTacac < 1:86447‑M2/9‑1 (MQ=255) ctggtgatttttattgattgctgagttttgaatacattgaaCGTCTacac > 1:251170‑M2/42‑50 (MQ=255) tggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:1774162‑M2/41‑50 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACtt < 1:2217390‑M2/11‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 1:1417080‑M2/10‑1 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc < 1:211307‑M2/13‑1 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:800126‑M2/37‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:895679‑M2/37‑50 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt < 1:810525‑M2/14‑1 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt < 1:552011‑M2/14‑1 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc < 1:1797898‑M2/16‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt < 1:74113‑M2/17‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt < 1:1117579‑M2/17‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:931112‑M2/33‑50 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg < 1:2200217‑M2/18‑1 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:1910006‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:738975‑M2/32‑49 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa < 1:48035‑M2/22‑1 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:86061‑M2/28‑50 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc > 1:1883037‑M2/27‑50 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:2057498‑M2/17‑49 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGc < 1:2132818‑M2/34‑1 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt > 1:1239177‑M2/13‑49 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa < 1:2508577‑M2/39‑1 (MQ=255) acattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg > 1:103702‑M2/9‑49 (MQ=255) acattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg > 1:2477754‑M2/9‑49 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGa < 1:1637216‑M2/42‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCt < 1:540621‑M2/46‑1 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:2389802‑M2/3‑49 (MQ=255) | AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > NC_000913/738914‑739009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |