| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 34 (1.120) | 31/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066257‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > NC_000913/2080592‑2080639 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGC < 1:2040811/50‑1AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:2548622/1‑49 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCA < 1:1678277/50‑1 CTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG > 1:519318/1‑49 TATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA > 1:2100989/1‑49 ATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAA > 1:1920032/1‑50 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC > 1:2073704/1‑50 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAA < 1:352191/48‑1 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC > 1:958826/1‑50 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:1816906/49‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:1905404/49‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT < 1:1871166/50‑1 CCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTA < 1:1326477/50‑1 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT < 1:434208/50‑1 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAG < 1:973205/49‑1 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:1870335/1‑46 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:180240/1‑46 CGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGA < 1:2561759/47‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA < 1:1757676/50‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA > 1:2297386/1‑49 CCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAA < 1:1447799/50‑1 CCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:903892/1‑49 ATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG > 1:932903/1‑50 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC < 1:2112918/50‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC < 1:1656979/50‑1 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:1967169/1‑50 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGC < 1:2148121/49‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > 1:2100126/1‑49 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:1113830/1‑50 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCA > 1:1855686/1‑50 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT < 1:138098/50‑1 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGT < 1:845658/50‑1 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG > 1:1495529/1‑50 TTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > 1:2631114/1‑50 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066257‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > NC_000913/2080592‑2080639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |