New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2066304 | NA (NA) | 34 (1.120) | 31/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor |
GCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080544‑2080640 | agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:2548622‑M2/49‑49 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGc < 1:2040811‑M2/2‑1 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCa < 1:1678277‑M2/3‑1 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:519318‑M2/46‑49 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 1:2100989‑M2/45‑49 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:1920032‑M2/44‑50 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:352191‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc > 1:2073704‑M2/43‑50 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc > 1:958826‑M2/41‑50 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:1816906‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:1905404‑M2/11‑1 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt < 1:1871166‑M2/13‑1 (MQ=255) ccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTa < 1:1326477‑M2/14‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt < 1:434208‑M2/16‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1870335‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:180240‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:973205‑M2/19‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgaga < 1:2561759‑M2/20‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa < 1:1757676‑M2/24‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa > 1:2297386‑M2/27‑49 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaa < 1:1447799‑M2/25‑1 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:903892‑M2/26‑49 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg > 1:932903‑M2/24‑50 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:2112918‑M2/28‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:1656979‑M2/28‑1 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcgc < 1:2148121‑M2/30‑1 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:1967169‑M2/20‑50 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt > 1:2100126‑M2/16‑49 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:1113830‑M2/15‑50 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa > 1:1855686‑M2/11‑50 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt < 1:138098‑M2/43‑1 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt < 1:845658‑M2/45‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg > 1:1495529‑M2/4‑50 (MQ=255) ttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg > 1:2631114‑M2/3‑50 (MQ=255) gcaGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc > 1:154586/1‑49 (MQ=255) | GCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080544‑2080640 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |