New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 226599 | NA (NA) | 32 (1.440) +GACGAATACCATT |
25/72 | 0.0 | NA | noncoding (841/2904 nt) | rrlH | 23S ribosomal RNA |
? | NC_000913 | 226613 = | NA (NA) | noncoding (855/2904 nt) | rrlH | 23S ribosomal RNA |
GAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCC > NC_000913/226557‑226647 | gagaTAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACt > 1:1993665/1‑49 (MQ=35) tGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCgg > 1:1222374/1‑50 (MQ=38) ggTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCggg > 1:1892657/1‑50 (MQ=38) gTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCgggg > 1:1374553/1‑50 (MQ=38) gTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCgg < 1:2353470/48‑1 (MQ=38) ccccGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTa > 1:2116743/1‑48 (MQ=38) cccGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTagag > 1:2701306/1‑50 (MQ=38) ccGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGc < 1:161439/50‑1 (MQ=38) gAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCAc > 1:180133/1‑50 (MQ=38) aaaGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACt < 1:1813322/50‑1 (MQ=38) aaGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTg > 1:2142564/1‑50 (MQ=38) aaGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTg < 1:1785881/50‑1 (MQ=38) gCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGtt < 1:2002754/50‑1 (MQ=38) cTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGttt < 1:844934/50‑1 (MQ=38) cTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGttt < 1:2024451/50‑1 (MQ=38) tATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTc > 1:1197112/1‑50 (MQ=38) tttAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTc < 1:1437208/48‑1 (MQ=38) tttAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTc < 1:1381230/48‑1 (MQ=38) tttAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCgg < 1:1497901/50‑1 (MQ=38) tAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAggg < 1:347912/50‑1 (MQ=38) gcCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGt > 1:1703895/1‑49 (MQ=38) cTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCAt < 1:1051201/50‑1 (MQ=38) cGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATcc > 1:894371/1‑50 (MQ=38) | GAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCC > NC_000913/226557‑226647 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |