| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 39 [0] | [0] 40 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 39 (1.420) | 32/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601153‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614796‑2614844 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:122678/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG > 1:371637/1‑49 ATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGA < 1:423623/49‑1 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAAC < 1:241388/49‑1 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT > 1:1130754/1‑50 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT < 1:2286422/50‑1 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT > 1:54711/1‑50 GAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGc > 1:1653720/1‑49 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:2291569/50‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT < 1:1261920/49‑1 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG < 1:1558681/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG < 1:458771/50‑1 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG < 1:1483092/50‑1 TGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAA < 1:1098385/50‑1 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA < 1:1219925/50‑1 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAG < 1:279866/49‑1 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAG < 1:2139047/49‑1 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT > 1:256254/1‑50 ATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC > 1:920223/1‑50 ATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC > 1:1965694/1‑50 CATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT > 1:733171/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT < 1:1656298/49‑1 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG < 1:854208/49‑1 TCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC < 1:1868867/49‑1 TCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:662150/1‑49 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGA > 1:146159/1‑50 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT > 1:2059383/1‑50 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT > 1:547318/1‑50 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT < 1:2104979/50‑1 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT < 1:312742/50‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG < 1:1619101/50‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG > 1:1488955/1‑50 GCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC < 1:1917865/50‑1 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA < 1:1342293/50‑1 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA < 1:53964/50‑1 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA < 1:1722047/50‑1 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > 1:346244/1‑50 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT < 1:319241/50‑1 CCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > 1:2104474/1‑50 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601153‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614796‑2614844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |