| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 39 [0] | [0] 40 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 39 (1.420) | 32/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601153‑2601249 | ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:122678‑M1/1‑48 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:371637‑M1/1‑47 (MQ=255) aTGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcga < 1:423623‑M1/49‑4 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaac < 1:241388‑M1/49‑7 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:1130754‑M1/1‑41 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt < 1:2286422‑M1/50‑10 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:54711‑M1/1‑41 (MQ=255) gAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgc > 1:1653720‑M1/1‑37 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:2291569‑M1/50‑15 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgt < 1:1261920‑M1/49‑14 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg < 1:1558681‑M1/50‑16 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg < 1:458771‑M1/50‑17 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:1483092‑M1/50‑21 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaa < 1:1098385‑M1/50‑23 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaaga < 1:1219925‑M1/50‑25 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:279866‑M1/49‑24 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:2139047‑M1/49‑24 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:256254‑M1/1‑22 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:920223‑M1/1‑20 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:1965694‑M1/1‑20 (MQ=255) cATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt > 1:733171‑M1/1‑18 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt < 1:1656298‑M1/49‑33 (MQ=255) ttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcg < 1:854208‑M1/49‑36 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc < 1:1868867‑M1/49‑37 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:662150‑M1/1‑13 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:146159‑M1/1‑12 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:2059383‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:547318‑M1/1‑11 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt < 1:2104979‑M1/50‑41 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt < 1:312742‑M1/50‑42 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttg < 1:1619101‑M1/50‑43 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttg > 1:1488955‑M1/1‑8 (MQ=255) gCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttgcc < 1:1917865‑M1/50‑45 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca < 1:1342293‑M1/50‑47 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca < 1:53964‑M1/50‑47 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca < 1:1722047‑M1/50‑47 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat > 1:346244‑M1/1‑3 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:319241‑M1/50‑48 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg > 1:2104474‑M1/1‑1 (MQ=255) | TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601153‑2601249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |