| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 226599 | NA (NA) | 24 (1.200) +GACGAATACCATT |
15/72 | 0.1 | NA | noncoding (841/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | NC_000913 | 226613 = | NA (NA) | noncoding (855/2904 nt) | rrlH | 23S ribosomal RNA | |||||
GGAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCC > NC_000913/226556‑226648 | ggAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACt < 1:31682/50‑1 (MQ=35) agaTAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCa > 1:110049/1‑50 (MQ=38) agaTAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCa > 1:417208/1‑50 (MQ=38) agaTAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCa > 1:2173325/1‑50 (MQ=38) aTAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCAtc < 1:1291560/50‑1 (MQ=38) tAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCAtct > 1:826487/1‑50 (MQ=38) tAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCAtct < 1:2110534/50‑1 (MQ=38) gCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCAtctc < 1:1066964/49‑1 (MQ=38) gCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCAtctc < 1:729858/49‑1 (MQ=38) cTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCg < 1:1039435/50‑1 (MQ=38) cTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCg < 1:1493355/50‑1 (MQ=38) gTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCgggg < 1:1767798/50‑1 (MQ=38) gTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCgg < 1:200858/48‑1 (MQ=38) ccGAAAGCTATTTAGGTAGCGCCTCGTGAACTCCTCTCCGGGGGTagag > 1:1640678/1‑49 (MQ=255) ccGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGc < 1:937621/50‑1 (MQ=38) ccGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGc < 1:759086/50‑1 (MQ=38) ccGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGc < 1:1769762/50‑1 (MQ=38) gAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCAc < 1:1003351/50‑1 (MQ=38) gAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCAc < 1:209990/50‑1 (MQ=38) gAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCAc < 1:1294825/50‑1 (MQ=38) aaaGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACt > 1:1242741/1‑50 (MQ=38) aaGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTg > 1:1295907/1‑50 (MQ=38) cTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGttt < 1:295428/50‑1 (MQ=38) tATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTc > 1:534490/1‑50 (MQ=38) tATTTAGGGAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTc > 1:2240416/1‑50 (MQ=255) aGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGc > 1:1446702/1‑48 (MQ=38) tAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAggg < 1:511174/50‑1 (MQ=38) tAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAggg < 1:1156983/50‑1 (MQ=38) cgcCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGt > 1:1487140/1‑50 (MQ=38) cTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCAt < 1:2246783/50‑1 (MQ=38) cTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCAt < 1:38371/50‑1 (MQ=38) gTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATccc < 1:2268539/50‑1 (MQ=38) gTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATccc > 1:1487468/1‑50 (MQ=38) gTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATcc < 1:1343049/49‑1 (MQ=38) | GGAGATAGCTGGTTCTCCCCGAAAGCTATTTAGGTAGCGCCTCGTGAACTCATCTCCGGGGGTAGAGCACTGTTTCGGCAAGGGGGTCATCCC > NC_000913/226556‑226648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |