| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 92,854 | (GCG)4→3 | coding (1442‑1444/1767 nt) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 92844 | 92846 | 3 | 23 [0] | [0] 23 | ftsI | peptidoglycan DD‑transpeptidase FtsI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 92847 = | 0 (0.000) | 18 (0.830) | 18/78 | 0.1 | 100% | coding (1435/1767 nt) | ftsI | peptidoglycan DD‑transpeptidase FtsI |
| ? | NC_000913 | = 92843 | 0 (0.000) | coding (1431/1767 nt) | ftsI | peptidoglycan DD‑transpeptidase FtsI | |||||
CATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTAAAA > NC_000913/92798‑92895 | atccattgtccgcactgtggtgcatatgatggaaagcgtggcgctaccag < 1:1475437‑M1/1‑1 (MQ=255) ttgtccgcactgtggtgcatatgatggaaagcgtggcgctaccaggcggc < 1:801058‑M1/6‑1 (MQ=255) ttgtccgcactgtggtgcatatgatggaaagcgtggcgctaccaggcggc > 1:318965‑M1/45‑50 (MQ=255) tccgcactgtggtgcatatgatggaaagcgtggcgctaccaggcggcggc > 1:1014093‑M1/42‑50 (MQ=255) cgcgctgtggtgcatatgatggaaagcatggcgctaccaGgcggcggcg > 1:1466164‑M1/40‑49 (MQ=255) cactgtggtgcatatgatggaaagcgtggcgctaccaGGCGGCGGCGTGa > 1:1322646‑M1/38‑50 (MQ=255) tgtggtgcatatgatggaaagcgtggcgctaccaGGCGGCGGCGTGAAgg < 1:1007278‑M1/16‑1 (MQ=255) catatgatggaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGAt > 1:949566‑M1/28‑50 (MQ=255) tgatggaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTaaa > 1:2340849‑M1/24‑50 (MQ=255) tgatggaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTa < 1:2277147‑M1/25‑1 (MQ=255) ggaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGc < 1:1309943‑M1/30‑1 (MQ=255) gaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCta > 1:1734540‑M1/19‑50 (MQ=255) gaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCta < 1:1868390‑M1/32‑1 (MQ=255) aaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCtat > 1:2076337‑M1/18‑50 (MQ=255) cgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCtatcgta > 1:827711‑M1/14‑50 (MQ=255) gtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCtatcgtat < 1:746076‑M1/38‑1 (MQ=255) gcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCtatcgtatcg > 1:1971813‑M1/10‑49 (MQ=255) ctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCAt < 1:1009946‑M1/44‑1 (MQ=255) taccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCAt < 1:2031079‑M1/44‑1 (MQ=255) ccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTa < 1:43959‑M1/46‑1 (MQ=255) caGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTaaa > 1:1681788‑M1/3‑50 (MQ=255) caGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTaa < 1:829473‑M1/47‑1 (MQ=255) aGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTaaaa < 1:1733127‑M1/49‑1 (MQ=255) | CATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTAAAA > NC_000913/92798‑92895 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |