| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 35 [0] | [0] 33 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 30 (0.990) | 24/96 | 0.1 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389852‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > NC_000913/399806‑399851 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:2211955/1‑49 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:686942/1‑49 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:320449/48‑1 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 1:1048375/49‑1 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 1:1872481/49‑1 ACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 1:2188292/49‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC > 1:1370158/1‑49 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 1:1703568/49‑1 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:994724/1‑49 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 1:2038070/49‑1 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA < 1:1233893/49‑1 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:2232624/1‑48 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:886144/1‑48 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA < 1:950334/48‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:420382/1‑49 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA < 1:485005/49‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA > 1:434343/1‑49 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAAT < 1:695642/48‑1 TGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:1891572/1‑49 TGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATT > 1:1693258/1‑49 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 1:2306003/48‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:1054895/49‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:389487/49‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 1:2269460/49‑1 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT > 1:262503/1‑49 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA > 1:2188742/1‑49 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCA < 1:2224553/48‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC < 1:446488/49‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:642694/1‑49 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:1958028/1‑49 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389852‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > NC_000913/399806‑399851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |