| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 37 (1.220) | 30/96 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066258‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG > NC_000913/2080592‑2080638 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGC < 1:1833045/49‑1GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:679274/1‑48GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:2226956/1‑48 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC < 1:389136/48‑1 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT < 1:1896872/48‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC > 1:1104263/1‑49 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:154593/49‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC < 1:2060365/48‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:1411280/1‑49 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT < 1:491580/49‑1 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG < 1:1571767/48‑1 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG < 1:2212784/48‑1 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGA < 1:771515/48‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA < 1:1219637/49‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT > 1:2265012/1‑48 CATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:2080224/1‑48 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG < 1:1142310/49‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG < 1:1292897/49‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG > 1:2183498/1‑49 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCG > 1:483114/1‑49 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGC > 1:134471/1‑49 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT < 1:61366/49‑1 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:1382552/1‑49 AGGCGTTATCCACAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT < 1:1742824/49‑1 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:1774144/1‑48 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:1089138/1‑48 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:648211/49‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCA > 1:2181979/1‑48 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > 1:2004301/1‑48 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:1604812/1‑49 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAGGCGCTCATAAC < 1:713383/48‑1 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTC < 1:313558/49‑1 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAT < 1:1245576/49‑1 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:794886/49‑1 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:722137/49‑1 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:531423/49‑1 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG < 1:462349/48‑1 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066258‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG > NC_000913/2080592‑2080638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |