New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2066304 | NA (NA) | 37 (1.220) | 30/96 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor |
CGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080545‑2080640 | gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:679274‑M2/48‑48 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:2226956‑M2/48‑48 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGc < 1:1833045‑M2/2‑1 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc < 1:389136‑M2/8‑1 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACt < 1:1896872‑M2/9‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc > 1:1104263‑M2/39‑49 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:154593‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc < 1:2060365‑M2/10‑1 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCg > 1:1411280‑M2/38‑49 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt < 1:491580‑M2/16‑1 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:1571767‑M2/17‑1 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:2212784‑M2/17‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATga < 1:771515‑M2/18‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt > 1:2265012‑M2/27‑48 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa < 1:1219637‑M2/23‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:2080224‑M2/25‑48 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg > 1:2183498‑M2/23‑49 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg < 1:1142310‑M2/27‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg < 1:1292897‑M2/27‑1 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg > 1:483114‑M2/21‑49 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcgc > 1:134471‑M2/20‑49 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:1382552‑M2/19‑49 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt < 1:61366‑M2/31‑1 (MQ=255) aggcgttatccacagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt < 1:1742824‑M2/31‑1 (MQ=255) ggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:1089138‑M2/18‑48 (MQ=255) ggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:1774144‑M2/18‑48 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCa > 1:2181979‑M2/16‑48 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:648211‑M2/34‑1 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt > 1:2004301‑M2/15‑48 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:1604812‑M2/14‑49 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAGGCGCTCATAAc < 1:713383‑M2/37‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTc < 1:313558‑M2/39‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAt < 1:1245576‑M2/41‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:722137‑M2/46‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:794886‑M2/46‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:531423‑M2/46‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg < 1:462349‑M2/47‑1 (MQ=255) gcaGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc > 1:131504/1‑49 (MQ=255) | CGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080545‑2080640 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |