| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 49 [0] | [0] 50 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 46 (1.300) | 37/92 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729317‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > NC_000913/738963‑739009 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 1:1770693/1‑49AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:1508005/49‑1 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:812557/49‑1 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT < 1:1503679/49‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:121126/1‑49 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC < 1:519182/49‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC < 1:1329966/49‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:761033/49‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:562728/1‑48 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:318727/49‑1 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:2415771/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:572666/48‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 1:1322685/1‑48 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:1629999/48‑1 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA > 1:2254372/1‑49 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:138610/1‑49 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC < 1:2451407/49‑1 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT > 1:1387922/1‑49 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC < 1:1693499/48‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:555056/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:1377445/1‑49 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:1299034/1‑49 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:417708/1‑49 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:1057720/1‑49 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:1595296/1‑49 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:2019996/49‑1 TGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:613845/1‑47 TGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:341492/1‑47 GAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:153102/1‑49 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGG < 1:521865/49‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGG < 1:2623761/49‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG < 1:1375/48‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCA < 1:543978/47‑1 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGC < 1:2090300/48‑1 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:1472792/1‑47 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:1292584/1‑49 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:2058173/1‑49 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:2369837/1‑48 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTA < 1:433774/49‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT < 1:2405849/48‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:2314971/1‑49 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA > 1:342464/1‑49 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT < 1:1890853/49‑1 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 1:264643/1‑49 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 1:1552389/1‑48 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 1:1445268/1‑48 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:2381779/1‑49 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:1863830/1‑49 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:1983011/1‑49 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729317‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > NC_000913/738963‑739009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |