| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 49 [0] | [0] 50 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 46 (1.300) | 37/92 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
AATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > NC_000913/738915‑739010 | aaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:1770693‑M2/49‑49 (MQ=255)aaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:1508005‑M2/1‑1 (MQ=255) aggcaactggtgatttttattgattgctgagttttgaatacattgaaCg < 1:812557‑M2/2‑1 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGt < 1:1503679‑M2/3‑1 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:121126‑M2/46‑49 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc < 1:519182‑M2/4‑1 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc < 1:1329966‑M2/4‑1 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:562728‑M2/45‑48 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCt < 1:761033‑M2/5‑1 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa < 1:318727‑M2/6‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTac < 1:2415771‑M2/7‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:1322685‑M2/39‑48 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 1:1629999‑M2/10‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 1:572666‑M2/10‑1 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa > 1:2254372‑M2/38‑49 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:138610‑M2/36‑49 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTc < 1:2451407‑M2/15‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc < 1:1693499‑M2/16‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt > 1:1387922‑M2/33‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:555056‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:1377445‑M2/32‑49 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa > 1:1299034‑M2/28‑49 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:1595296‑M2/27‑49 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:1057720‑M2/27‑49 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:417708‑M2/27‑49 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc < 1:2019996‑M2/24‑1 (MQ=255) tgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:613845‑M2/21‑47 (MQ=255) tgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:341492‑M2/21‑47 (MQ=255) gagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:153102‑M2/20‑49 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCa < 1:543978‑M2/29‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAgg < 1:521865‑M2/31‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAgg < 1:2623761‑M2/31‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg < 1:1375‑M2/30‑1 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:1472792‑M2/15‑47 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGc < 1:2090300‑M2/34‑1 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:2058173‑M2/14‑49 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:1292584‑M2/14‑49 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:2369837‑M2/13‑48 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt < 1:2405849‑M2/37‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTa < 1:433774‑M2/38‑1 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:2314971‑M2/10‑49 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGaa > 1:342464‑M2/7‑49 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt > 1:264643‑M2/6‑49 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt < 1:1890853‑M2/44‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc > 1:1552389‑M2/4‑48 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc > 1:1445268‑M2/4‑48 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:2381779‑M2/3‑49 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:1983011‑M2/3‑49 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:1863830‑M2/3‑49 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAc > 1:830703/1‑48 (MQ=255) | AATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > NC_000913/738915‑739010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |