Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,627,518 Δ25,244 bp [ydfG]–[ynfP] 48 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1627518 1652761 25244 36 [0] [0] 36 [ydfG]–[ynfP] [ydfG],ydfH,ydfZ,ydfI,ydfJ,ynfT,ydfK,pinQ,tfaQ,ydfN,nohA,ynfO,ydfO,gnsB,ynfN,ynfR,ynfQ,cspI,rzpQ,rzoQ,rrrQ,ydfR,essQ,cspB,cspF,ynfS,ydfT,ydfU,rem,hokD,relE,relB,ydfV,flxA,ydfW,ydfX,dicC,dicA,ydfA,ydfB,ydfC,dicF,dicB,ydfD,ydfE,insD‑7,intQ,[ynfP]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 16275170 (0.000)36 (0.990) 25/94 0.1 100% coding (1/747 nt) ydfG 3‑hydroxy acid dehydrogenase
?NC_000913 1652762 = 0 (0.000)coding (77/111 nt) ynfP protein YnfP

TCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1627471‑1627517
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCC  >  NC_000913/1652762‑1652806
                                                                                            
TCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAG                                             >  1:273383/1‑49
 CCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGC                                            >  1:853940/1‑49
   CGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGC                                          <  1:1746140/49‑1
    GTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCA                                         <  1:2364379/49‑1
    GTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCA                                         <  1:2643320/49‑1
       CTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTG                                      >  1:1111313/1‑49
       CTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTG                                      >  1:372440/1‑49
       CTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTG                                      <  1:1122220/49‑1
       CTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGT                                       <  1:1965359/48‑1
               TTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCA                              >  1:1526353/1‑49
               TTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCA                              >  1:1632829/1‑49
               TTGACACACAAAAGCGTTGAGGAACAGTGAAAAGCGCAGTGCCCAGCCA                              >  1:1816082/1‑49
                TGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCAT                             >  1:1324597/1‑49
                TGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCAT                             >  1:1504243/1‑49
                  ACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCC                           <  1:800063/49‑1
                  ACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATC                            <  1:1283950/48‑1
                    ACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCG                         <  1:909232/49‑1
                    ACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCC                          >  1:934743/1‑48
                    ACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCC                          >  1:2031747/1‑48
                       CAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATA                      >  1:2349469/1‑49
                         AAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACT                    <  1:2207768/49‑1
                            GCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCT                 <  1:2617247/49‑1
                            GCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCT                 <  1:1753805/49‑1
                            GCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCAGCCCGATACTGCT                 <  1:2421157/49‑1
                              GTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGC               >  1:1442785/1‑49
                              GTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGC               >  1:290068/1‑49
                               TTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCT              <  1:1090978/49‑1
                                 GAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTT             <  1:531117/48‑1
                                  AGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTT            >  1:2800283/1‑48
                                  AGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTT            >  1:214108/1‑48
                                      ACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACC        >  1:1341539/1‑48
                                       CAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCA       >  1:288044/1‑48
                                         GTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAAT    <  1:2821108/49‑1
                                          TGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATC   <  1:2535853/49‑1
                                            AGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCC  <  1:1312165/48‑1
                                            AGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCC  <  1:1187088/48‑1
                                                                                            
TCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1627471‑1627517
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCC  >  NC_000913/1652762‑1652806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.