| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 40 (1.080) | 30/96 | 0.1 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066259‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > NC_000913/2080592‑2080639 CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:253698/1‑47 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAA < 1:1067675/48‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAA < 1:656397/48‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA < 1:1345925/47‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA < 1:207306/47‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA < 1:1739669/47‑1 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT > 1:575875/1‑49 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT > 1:5559/1‑49 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC > 1:519440/1‑49 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT < 1:1867979/48‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC < 1:1952419/48‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:48453/1‑49 CGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTA < 1:2245608/49‑1 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:1737785/49‑1 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA > 1:1840805/1‑49 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:2082539/49‑1 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA > 1:439477/1‑49 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT > 1:509103/1‑48 ATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAA < 1:2136987/49‑1 ATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:1525859/1‑47 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG > 1:967962/1‑49 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG < 1:2275791/49‑1 TTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC > 1:1205088/1‑49 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCG > 1:1736447/1‑49 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC < 1:2546146/48‑1 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC < 1:950422/48‑1 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCG < 1:1224923/48‑1 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > 1:2159203/1‑48 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > 1:1289855/1‑48 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:909439/1‑49 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:1664323/1‑49 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAC > 1:99380/1‑49 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTC < 1:251695/49‑1 CCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCA > 1:528352/1‑49 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAT < 1:629651/49‑1 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAT < 1:1710618/49‑1 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCA < 1:371301/48‑1 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATC > 1:168377/1‑49 CAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT < 1:395685/49‑1 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > 1:2496811/1‑49 CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066259‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > NC_000913/2080592‑2080639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |