New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2066304 | NA (NA) | 40 (1.080) | 30/96 | 0.1 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor |
GGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > NC_000913/2080546‑2080639 | cctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:253698‑M2/47‑47 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:1067675‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:656397‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa < 1:1345925‑M2/5‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa < 1:207306‑M2/5‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa < 1:1739669‑M2/5‑1 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACt > 1:575875‑M2/41‑49 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACt > 1:5559‑M2/41‑49 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACt < 1:1867979‑M2/9‑1 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc > 1:519440‑M2/40‑49 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc < 1:1952419‑M2/10‑1 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCg > 1:48453‑M2/38‑49 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTa < 1:2245608‑M2/14‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 1:1737785‑M2/15‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa > 1:1840805‑M2/35‑49 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 1:2082539‑M2/15‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa > 1:439477‑M2/35‑49 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt > 1:509103‑M2/27‑48 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:2136987‑M2/26‑1 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:1525859‑M2/24‑47 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg > 1:967962‑M2/23‑49 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg < 1:2275791‑M2/27‑1 (MQ=255) ttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc > 1:1205088‑M2/22‑49 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg > 1:1736447‑M2/21‑49 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:2546146‑M2/28‑1 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:950422‑M2/28‑1 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg < 1:1224923‑M2/29‑1 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt > 1:2159203‑M2/15‑48 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt > 1:1289855‑M2/15‑48 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:909439‑M2/14‑49 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:1664323‑M2/14‑49 (MQ=255) tatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:99380‑M2/13‑49 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTc < 1:251695‑M2/39‑1 (MQ=255) ccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa > 1:528352‑M2/10‑49 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa < 1:371301‑M2/40‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAt < 1:629651‑M2/41‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAt < 1:1710618‑M2/41‑1 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc > 1:168377‑M2/8‑49 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt < 1:395685‑M2/43‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg > 1:2496811‑M2/2‑49 (MQ=255) | GGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > NC_000913/2080546‑2080639 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |