| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 40 [0] | [0] 40 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 40 (1.080) | 28/96 | 0.1 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165104‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT > NC_000913/2177211‑2177258 GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAAT > 1:494243/1‑49GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAAT < 1:2479769/49‑1 CATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATC > 1:532102/1‑49 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT > 1:709249/1‑49 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT < 1:2430041/49‑1 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT < 1:180333/49‑1 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT < 1:2065818/49‑1 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG < 1:1369390/49‑1 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG < 1:1752327/49‑1 TCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT > 1:709891/1‑49 TCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT > 1:2049869/1‑49 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:2634844/1‑48 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:1870044/1‑48 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA > 1:860632/1‑49 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA < 1:1092426/49‑1 ACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT > 1:2345312/1‑49 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT < 1:654248/49‑1 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT < 1:2022015/49‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:1230001/49‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA > 1:1144292/1‑48 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:508970/49‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAAT < 1:763519/48‑1 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATA < 1:85519/49‑1 CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG > 1:2568736/1‑48 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAA < 1:825830/49‑1 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAA < 1:2473952/49‑1 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA > 1:2577889/1‑48 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA > 1:1748347/1‑48 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT < 1:1471529/49‑1 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT < 1:2291233/49‑1 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATT < 1:492801/49‑1 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:1671347/1‑48 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:1943667/1‑48 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG > 1:752154/1‑49 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG > 1:459445/1‑49 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG > 1:2194950/1‑49 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:149957/48‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT < 1:2849869/49‑1 GAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT < 1:1012184/49‑1 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT > 1:1869282/1‑49 GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165104‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTT > NC_000913/2177211‑2177258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |