| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1994264 = | 34 (0.920) | 61 (2.350) +ATTTCTAATGTCGT |
4/68 | 1.9 | 70.1% | coding (443/1833 nt) | uvrC | excision nuclease subunit C |
| ? | NC_000913 | 3208976 = | 40 (1.080) | coding (953/1464 nt) | ttdT | L‑tartrate:succinate antiporter | |||||
CGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGG > NC_000913/1994222‑1994310 | cgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCtttt < 1:1505064/49‑1 (MQ=255)cgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCtttt > 1:269648/1‑49 (MQ=255) aTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGc < 1:2512911/49‑1 (MQ=255) ttGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCa < 1:661510/49‑1 (MQ=255) tGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAg > 1:278440/1‑49 (MQ=255) gCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAg > 1:1815909/1‑48 (MQ=255) cGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGt < 1:1063328/48‑1 (MQ=255) cGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTa < 1:679/49‑1 (MQ=255) aTAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgc > 1:2674503/1‑49 (MQ=255) aTAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgc > 1:249200/1‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:1196881‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:2806816‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:2841103‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:2768098‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:438119‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:1653794‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:467636‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:526412‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:1584510‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:2050834‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:817492‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:2573104‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:2423041‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:2433072‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:2559768‑M1/16‑1 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:2729720‑M1/33‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1756029‑M1/17‑1 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:1394366‑M1/33‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:1514396‑M1/33‑49 (MQ=255) aaaCACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgcgc > 1:1816064/1‑49 (MQ=255) aaaCACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgcgc > 1:2266099/1‑49 (MQ=255) cagaagcagcatcagtgacgacattagcaatATCCTTTGCAGTAgcgc < 1:1752754‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:998967‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:2335916‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1090524‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:2051081‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:202124‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:390140‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1924371‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:2063760‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:918870‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:590669‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:1737379‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:1223841‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:8356‑M1/32‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:2505294‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:1238472‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:2151028‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:1385526‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:231667‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:2608690‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:2734160‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:2829513‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:2600796‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:570215‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:2335596‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:1689812‑M1/31‑49 (MQ=255) acacTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgcgc > 1:849328/1‑47 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:118344‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1365401‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:2635649‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1379525‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:2271994‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1624381‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1656517‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1755402‑M1/20‑2 (MQ=255) gaagcagcaccagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1508120‑M1/20‑2 (MQ=255) acTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgt < 1:2333004/49‑1 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:2862191‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:107451‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:63905‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:401520‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:2460130‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1873154‑M1/20‑2 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:2279492‑M1/20‑2 (MQ=255) tttCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGttt > 1:508806/1‑48 (MQ=255) cGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACg > 1:255699/1‑49 (MQ=255) gCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACg > 1:628330/1‑48 (MQ=255) gCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGt < 1:2647038/49‑1 (MQ=255) gCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGt < 1:2107995/49‑1 (MQ=255) cACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTa > 1:1739254/1‑49 (MQ=255) cACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTa > 1:1616430/1‑49 (MQ=255) aCTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTAc < 1:214805/49‑1 (MQ=255) tGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACgg > 1:13063/1‑49 (MQ=255) gCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACgg < 1:1736544/47‑1 (MQ=255) gCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCa > 1:2110579/1‑49 (MQ=255) gAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCa > 1:2748594/1‑47 (MQ=255) aaTGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAg > 1:1985823/1‑49 (MQ=255) aTGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGc < 1:2572585/49‑1 (MQ=255) gAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTc < 1:1493016/49‑1 (MQ=255) aaaaTCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCg < 1:2721892/49‑1 (MQ=255) aaaaTCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCg < 1:414402/49‑1 (MQ=255) aaaaTCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCg > 1:1408685/1‑49 (MQ=255) aaaaTCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCg < 1:239805/49‑1 (MQ=255) aaTCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCgg > 1:886866/1‑48 (MQ=255) | CGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGG > NC_000913/1994222‑1994310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |