| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 30 [0] | [0] 31 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 29 (1.060) | 25/96 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167437‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT > 1:419337/1‑49 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:65337/1‑49 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:607357/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1386509/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:1494114/1‑49 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:1180724/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:1986716/1‑49 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:739880/46‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:1347945/46‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 1:1824309/48‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:1372167/1‑49 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:559667/49‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 1:592260/49‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 1:482449/1‑49 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGG < 1:1078028/49‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:643648/48‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA < 1:1980633/49‑1 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:1559976/1‑49 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:322353/1‑49 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:311307/48‑1 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:952302/48‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA < 1:528841/49‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:1371244/49‑1 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:1037018/49‑1 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:825634/1‑49 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:2038601/49‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:1894517/49‑1 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:1221614/1‑48 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:953484/1‑49 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167437‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |