| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 30 [0] | [0] 31 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 29 (1.060) | 25/96 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATC > NC_000913/167435‑167531 | taatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa < 1:72441/49‑1 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAtt > 1:419337‑M1/1‑47 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc < 1:607357‑M1/49‑4 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:1386509‑M1/1‑46 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:65337‑M1/1‑46 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca > 1:1494114‑M1/1‑44 (MQ=255) ttCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccat < 1:1180724‑M1/49‑7 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac > 1:1986716‑M1/1‑38 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatat < 1:1347945‑M1/46‑9 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatat < 1:739880‑M1/46‑9 (MQ=255) aTCATTCACTTTACATCAGAGATATACCAttccatataacggccctgt < 1:1824309‑M1/48‑20 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:559667‑M1/49‑22 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac > 1:1372167‑M1/1‑28 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcc < 1:592260‑M1/49‑25 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcc > 1:482449‑M1/1‑25 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgg < 1:1078028‑M1/49‑28 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg < 1:643648‑M1/48‑27 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgga < 1:1980633‑M1/49‑29 (MQ=255) tttACATCAGAGATATACCAttccatataacggccctgtacgcctggac > 1:322353‑M1/1‑20 (MQ=255) tttACATCAGAGATATACCAttccatataacggccctgtacgcctggac > 1:1559976‑M1/1‑20 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacg < 1:952302‑M1/48‑31 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacg < 1:311307‑M1/48‑31 (MQ=255) aTCAGAGATATACCAttccatataacggccctgtacgcctggacggata < 1:528841‑M1/49‑35 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaag < 1:1371244‑M1/49‑38 (MQ=255) gagaTATACCAttccatataacggccctgtacgcctggacggataaagc < 1:1037018‑M1/49‑39 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgt > 1:825634‑M1/1‑9 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgtt < 1:2038601‑M1/49‑42 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttac < 1:1894517‑M1/49‑45 (MQ=255) cAttccatataacggccctgtacgcctggacggataaagcgtttacgc > 1:1221614‑M1/1‑2 (MQ=255) attccatataacggccctgtacgcctggacggataaagcgtttacgcga > 1:953484‑M1/1‑1 (MQ=255) | TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATC > NC_000913/167435‑167531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |