| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,320,144 | Δ16,489 bp | [atoS]–[yfaA] | [atoS], atoC, atoD, atoA, atoE, atoB, yfaP, yfaQ, yfaS, yfaT, [yfaA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2320144 | 2336632 | 16489 | 35 [0] | [0] 33 | [atoS]–[yfaA] | [atoS],atoC,atoD,atoA,atoE,atoB,yfaP,yfaQ,yfaS,yfaT,[yfaA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2320143 | 0 (0.000) | 32 (1.190) | 28/94 | 0.0 | 100% | coding (101/1827 nt) | atoS | sensory histidine kinase AtoS |
| ? | NC_000913 | 2336633 = | 0 (0.000) | coding (12/1689 nt) | yfaA | DUF2138 domain‑containing protein YfaA | |||||
TGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCTGAAAAAGAGAAAAA > NC_000913/2320095‑2320191 | tGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATAT > 1:1962755‑M1/1‑49 (MQ=255) aTGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATtt > 1:587796‑M1/1‑47 (MQ=255) aTGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATAT < 1:1966304‑M1/47‑1 (MQ=255) tGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttc < 1:1543257‑M1/49‑4 (MQ=255) ggCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttca > 1:852653‑M1/1‑45 (MQ=255) cAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcac > 1:945583‑M1/1‑43 (MQ=255) aTCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccac > 1:1233163‑M1/1‑41 (MQ=255) cTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactca > 1:442265‑M1/1‑38 (MQ=255) aTGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattg < 1:1384723‑M1/49‑15 (MQ=255) aTGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattg > 1:1866190‑M1/1‑35 (MQ=255) aTGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcat < 1:828536‑M1/47‑13 (MQ=255) tGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgc < 1:1941366‑M1/49‑16 (MQ=255) ggTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgc > 1:464638‑M1/1‑33 (MQ=255) gTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgcc < 1:955956‑M1/48‑17 (MQ=255) tCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgccac < 1:722055‑M1/49‑19 (MQ=255) ttGTCCCAACGCTTACTATTGGTTATATttcaccactcattgccacatt > 1:1516513‑M1/1‑28 (MQ=255) cAACGCTTACTATTGGTTATATttcaccactcattgccacattccttgt < 1:1924821‑M1/49‑28 (MQ=255) cAACGCTTACTATTGGTTATATttcaccactcattgccacattccttgt > 1:667669‑M1/1‑22 (MQ=255) cAACGCTTACTATTGGTTATATttcaccactcattgccacattccttgt < 1:1766779‑M1/49‑28 (MQ=255) gCTTACTATTGGTTATATttcaccactcattgccacattccttgtgta > 1:1059969‑M1/1‑18 (MQ=255) tACTATTGGTTATATttcaccactcattgccacattccttgtgtatagc > 1:1865813‑M1/1‑15 (MQ=255) cTATTGGTTATATttcaccactcattgccacattccttgtgtatagcc < 1:23905‑M1/48‑36 (MQ=255) cTATTGGTTATATttcaccactcattgccacattccttgtgtatagc > 1:1887750‑M1/1‑13 (MQ=255) cTATTGGTTATATttcaccactcattgccacattccttgtgtatagc > 1:782398‑M1/1‑13 (MQ=255) ttGGTTATATttcaccactcattgccacattccttgtgtatagccagcc < 1:1390967‑M1/49‑40 (MQ=255) ttGGTTATATttcaccactcattgccacattccttgtgtatagccagcc < 1:1233732‑M1/49‑40 (MQ=255) ttGGTTATATttcaccactcattgccacattccttgtgtatagccagc > 1:476444‑M1/1‑10 (MQ=255) ttGGTTATATttcaccactcattgccacattccttgtgtatagccagc < 1:1551046‑M1/48‑39 (MQ=255) ttGGTTATATttcaccactcattgccacattccttgtgtatagccagc < 1:1726898‑M1/48‑39 (MQ=255) ggTTATATttcaccactcattgccacattccttgtgtatagccagccat > 1:691733‑M1/1‑8 (MQ=255) ttATATttcaccactcattgccacattccttgtgtatagccagccattt < 1:1739521‑M1/49‑44 (MQ=255) tatttcaccactcattgccacattccttgtgtatagccagccatttttt < 1:1296314‑M1/49‑47 (MQ=255) tatttcaccactcattgccacattccttgtgtatagccagccattttt < 1:213274‑M1/48‑46 (MQ=255) atttcaccactcattgccacattccttgtgtatagccagccatttttta > 1:1872254‑M1/1‑2 (MQ=255) tttcaccactcattgccacattccttgtgtatagccagccattttttac > 1:699895‑M1/1‑1 (MQ=255) | TGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCTGAAAAAGAGAAAAA > NC_000913/2320095‑2320191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |