| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 42 (1.550) | 36/96 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066258‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > NC_000913/2080592‑2080639 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:1527001/1‑48 CTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:863550/1‑46 CTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:1734519/1‑46 ATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA > 1:545535/1‑48 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAA < 1:855547/48‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAA < 1:1394535/48‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA < 1:958805/47‑1 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC < 1:330960/48‑1 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT < 1:948416/48‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:1064322/49‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG < 1:1143400/49‑1 CCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT < 1:1883357/49‑1 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA > 1:1387154/1‑49 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTA < 1:1479282/47‑1 TTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:428160/1‑48 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG < 1:1391031/48‑1 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG < 1:122697/48‑1 TCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG < 1:647780/48‑1 TCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGAT > 1:2066401/1‑49 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA < 1:923565/49‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT < 1:1262202/48‑1 CCATTTAAGGCGTCATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA < 1:1730773/49‑1 CATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:577485/1‑48 TTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC > 1:192085/1‑49 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC < 1:1970666/48‑1 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC < 1:555681/48‑1 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT < 1:168830/49‑1 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTC < 1:1303678/49‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:635141/49‑1 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:147657/1‑49 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAC > 1:1226551/1‑49 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT > 1:778016/1‑49 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT > 1:1208695/1‑49 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTC < 1:1177620/49‑1 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT < 1:1659879/48‑1 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAT < 1:1492793/49‑1 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTG < 1:1565925/49‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGT > 1:1891813/1‑49 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:676955/49‑1 TTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG > 1:544765/1‑49 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > 1:1349954/1‑49 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG < 1:726472/48‑1 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066258‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > NC_000913/2080592‑2080639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |