| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 102 [0] | [0] 99 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 99 (1.120) | 60/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > NC_000913/2236718‑2236763 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:5068230/1‑50TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:5039050/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:3816898/1‑50 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:4094797/1‑49 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:3435815/1‑49 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:6562281/1‑49 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA < 1:4932467/50‑1 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:5117187/1‑50 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:1721724/1‑50 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC < 1:328384/50‑1 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:948961/1‑49 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:4755055/49‑1 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:4733814/49‑1 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:5283143/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:2765459/1‑49 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:2120438/1‑50 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA < 1:2900773/50‑1 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:1263654/1‑50 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT > 1:5556865/1‑50 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT > 1:508739/1‑50 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT > 1:3706828/1‑50 ATTGGTCCGATCCGGCGCAACGCCCCAACGGCCTGGATTATTGACCGAAT > 1:1412624/1‑50 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:5557033/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:1308322/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG > 1:5033064/1‑50 TGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC > 1:5637686/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:822074/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:3425219/49‑1 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:6201925/49‑1 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA < 1:1466704/50‑1 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA < 1:750100/50‑1 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:2406857/1‑50 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 1:1304170/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:6146692/1‑49 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC < 1:6250062/49‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:6394533/1‑49 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:5631529/1‑49 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC < 1:1849708/49‑1 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA < 1:2585179/50‑1 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:1892834/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA < 1:5561198/50‑1 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCAC < 1:2894817/50‑1 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCAC < 1:4919311/50‑1 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCAC < 1:1211972/50‑1 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA < 1:5127730/50‑1 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA < 1:5165814/50‑1 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA < 1:1812589/50‑1 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA < 1:2273151/50‑1 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:4164647/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT < 1:887107/50‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTC < 1:2826068/50‑1 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA < 1:283635/50‑1 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA < 1:5100/50‑1 CGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCAC < 1:1339887/50‑1 CGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCAC < 1:3013057/50‑1 CGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCAC < 1:2388706/50‑1 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA < 1:2615243/50‑1 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT < 1:4728425/50‑1 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT < 1:2361113/50‑1 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATC < 1:4169557/50‑1 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:6431466/1‑49 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:6547578/1‑49 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:4473603/1‑49 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:496853/1‑49 ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA > 1:123017/1‑50 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT < 1:4676503/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 1:5039428/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:4443164/1‑50 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:6545732/1‑50 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT > 1:3408324/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT < 1:4786076/50‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT < 1:6555926/50‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT < 1:2143282/50‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:6247771/49‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:5720268/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:1130903/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:1841439/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA > 1:2522855/1‑50 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:6157339/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG < 1:6001095/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG < 1:6473851/50‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG < 1:2035493/50‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC < 1:2069239/49‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC < 1:4202568/49‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:4486544/1‑50 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:824244/1‑50 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:5926705/1‑50 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:2289495/1‑50 GGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA > 1:1110609/1‑50 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAT > 1:5292001/1‑50 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGT < 1:5483988/48‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT < 1:2199602/50‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT > 1:4061969/1‑50 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT > 1:5968727/1‑50 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 1:270566/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:5967449/1‑50 TATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:4201046/1‑49 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:5459979/1‑48 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:3707183/1‑48 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > NC_000913/2236718‑2236763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |