| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 102 [0] | [0] 99 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 99 (1.120) | 60/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > NC_000913/2236669‑2236763 | taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:5068230‑M2/50‑50 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 1:5039050‑M2/1‑1 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:3816898‑M2/50‑50 (MQ=255) aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:4094797‑M2/49‑49 (MQ=255) aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:3435815‑M2/49‑49 (MQ=255) aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 1:6562281‑M2/49‑49 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa < 1:4932467‑M2/3‑1 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa > 1:5117187‑M2/48‑50 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa > 1:1721724‑M2/48‑50 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc < 1:328384‑M2/4‑1 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc > 1:948961‑M2/45‑49 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:4755055‑M2/5‑1 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:4733814‑M2/5‑1 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc > 1:5283143‑M2/45‑49 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 1:2765459‑M2/44‑49 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:2120438‑M2/43‑50 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa < 1:2900773‑M2/8‑1 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa > 1:1263654‑M2/43‑50 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt > 1:5556865‑M2/42‑50 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt > 1:508739‑M2/42‑50 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt > 1:3706828‑M2/42‑50 (MQ=255) attggtccgatccggcgcaacgccccaacggcctggattatTGACCGAAt > 1:1412624‑M2/42‑50 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 1:5557033‑M2/10‑1 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 1:1308322‑M2/10‑1 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg > 1:5033064‑M2/41‑50 (MQ=255) tggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc > 1:5637686‑M2/40‑50 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 1:3425219‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 1:6201925‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:822074‑M2/39‑50 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa < 1:1466704‑M2/14‑1 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa < 1:750100‑M2/14‑1 (MQ=255) ccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:2406857‑M2/36‑50 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAcc < 1:1304170‑M2/16‑1 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:6146692‑M2/35‑49 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc < 1:6250062‑M2/15‑1 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:6394533‑M2/35‑49 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:5631529‑M2/35‑49 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc < 1:1849708‑M2/15‑1 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca < 1:2585179‑M2/17‑1 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:1892834‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca < 1:5561198‑M2/17‑1 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcac < 1:2894817‑M2/18‑1 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcac < 1:4919311‑M2/18‑1 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcac < 1:1211972‑M2/18‑1 (MQ=255) tccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcaca < 1:5127730‑M2/19‑1 (MQ=255) tccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcaca < 1:5165814‑M2/19‑1 (MQ=255) tccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcaca < 1:1812589‑M2/19‑1 (MQ=255) tccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcaca < 1:2273151‑M2/19‑1 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:4164647‑M2/30‑50 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt < 1:887107‑M2/21‑1 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTc < 1:2826068‑M2/22‑1 (MQ=255) gcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTca < 1:283635‑M2/23‑1 (MQ=255) gcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTca < 1:5100‑M2/23‑1 (MQ=255) cgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcac < 1:1339887‑M2/24‑1 (MQ=255) cgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcac < 1:3013057‑M2/24‑1 (MQ=255) cgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcac < 1:2388706‑M2/24‑1 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca < 1:2615243‑M2/25‑1 (MQ=255) caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat < 1:4728425‑M2/26‑1 (MQ=255) caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat < 1:2361113‑M2/26‑1 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatc < 1:4169557‑M2/27‑1 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:6431466‑M2/24‑49 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:6547578‑M2/24‑49 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:4473603‑M2/24‑49 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:496853‑M2/24‑49 (MQ=255) acgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatca > 1:123017‑M2/23‑50 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat < 1:4676503‑M2/29‑1 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt < 1:5039428‑M2/30‑1 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt > 1:4443164‑M2/21‑50 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt > 1:6545732‑M2/21‑50 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt > 1:3408324‑M2/20‑50 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc < 1:6247771‑M2/32‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt < 1:4786076‑M2/33‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt < 1:6555926‑M2/33‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt < 1:2143282‑M2/33‑1 (MQ=255) caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCtt < 1:5720268‑M2/34‑1 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa < 1:1130903‑M2/35‑1 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa < 1:1841439‑M2/35‑1 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa > 1:2522855‑M2/16‑50 (MQ=255) atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc < 1:6157339‑M2/36‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg < 1:6001095‑M2/37‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg < 1:6473851‑M2/37‑1 (MQ=255) gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg < 1:2035493‑M2/39‑1 (MQ=255) gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgc < 1:2069239‑M2/38‑1 (MQ=255) gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgc < 1:4202568‑M2/38‑1 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc > 1:4486544‑M2/11‑50 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc > 1:824244‑M2/11‑50 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc > 1:5926705‑M2/11‑50 (MQ=255) ctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg > 1:2289495‑M2/10‑50 (MQ=255) ggattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTa > 1:1110609‑M2/8‑50 (MQ=255) gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGt < 1:5483988‑M2/42‑1 (MQ=255) gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAt > 1:5292001‑M2/7‑50 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt < 1:2199602‑M2/45‑1 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt > 1:4061969‑M2/6‑50 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt > 1:5968727‑M2/6‑50 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt < 1:270566‑M2/46‑1 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:5967449‑M2/5‑50 (MQ=255) tatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:4201046‑M2/4‑49 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:5459979‑M2/3‑48 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 1:3707183‑M2/3‑48 (MQ=255) | CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > NC_000913/2236669‑2236763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |