| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908 | 258683 | 776 | 116 [0] | [0] 119 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 88 (0.970) | 49/82 | 0.0 | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
Only 100 of 131 total aligned reads displayed.
CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > NC_000913/258684‑258732 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 1:3940452/50‑1 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 1:4304975/50‑1 AAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGA < 1:754353/50‑1 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:7997858/1‑48 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:2613771/1‑48 AGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTG > 1:1949200/1‑48 AGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGG < 1:483661/50‑1 GCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT < 1:8144632/50‑1 CAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 1:4679614/1‑49 AGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAA < 1:1620853/50‑1 AGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGT > 1:1495955/1‑48 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 1:2913630/50‑1 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT > 1:6360244/1‑50 ATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGT < 1:2260300/50‑1 TTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG < 1:795149/50‑1 TGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTG > 1:3150832/1‑49 GATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGC > 1:6109206/1‑49 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAA < 1:259844/50‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAA < 1:5033280/50‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAA < 1:6025643/50‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA < 1:6500774/49‑1 ATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA < 1:3429894/49‑1 ATCAAAAAATTTACCGCACTAGGCCCGTAGATTCGTGAAGGTAAGTGCA < 1:4302645/49‑1 AAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCA > 1:1675235/1‑46 AAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGAT < 1:1878266/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:33943/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:2552118/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:7598798/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:6787022/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAA < 1:742871/50‑1 AAATTTACCGCACTAGGCCCGTATATTCGTGAAGGCAAGTGCAAAGATAA > 1:8128709/1‑50 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT > 1:2720124/1‑50 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 1:4111612/50‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 1:4615408/50‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 1:2337238/50‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 1:2166428/50‑1 AATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAAT < 1:1793674/50‑1 ATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATC < 1:1070178/50‑1 ATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATC > 1:3249264/1‑50 TACCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGAT > 1:7831088/1‑50 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTC < 1:4618019/50‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTC < 1:3594924/50‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTC < 1:6391540/50‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:2339690/49‑1 CCGCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATT < 1:1980585/49‑1 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT < 1:8280695/50‑1 GCACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTT > 1:5102245/1‑50 ACTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTT < 1:4952447/50‑1 CTAGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTT > 1:7317931/1‑50 AGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:4392723/1‑49 AGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:7880456/1‑49 AGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:6432906/1‑49 AGGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC > 1:2974180/1‑49 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGA < 1:1383337/50‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCG < 1:2106532/49‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCG < 1:302311/49‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC < 1:4997323/48‑1 GGCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTC < 1:7168948/48‑1 GCCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGAT > 1:7963874/1‑50 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT > 1:7413673/1‑50 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 1:2956035/50‑1 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT > 1:1444173/1‑50 CCCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATT < 1:835952/50‑1 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:1842488/50‑1 CCGTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTG < 1:742246/50‑1 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC < 1:5367303/50‑1 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC > 1:42848/1‑50 GTATATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTC > 1:4005005/1‑50 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 1:7603947/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 1:1059848/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGG < 1:4302680/50‑1 TATTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTG < 1:613606/49‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCT < 1:3625161/50‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCT > 1:6657752/1‑50 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCT > 1:936633/1‑50 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC < 1:3240655/49‑1 TTCGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGC < 1:5645029/49‑1 CGTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTG < 1:5610308/49‑1 GTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTA < 1:7604972/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT < 1:3404327/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT < 1:4376404/50‑1 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAT > 1:1678612/1‑50 TGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCCGTAT > 1:7770980/1‑50 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGC < 1:6657337/50‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGC > 1:6145345/1‑50 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGC > 1:5858361/1‑50 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:3627177/49‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:4544148/49‑1 AAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATG < 1:6004211/49‑1 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT > 1:6112588/1‑50 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT < 1:6156345/50‑1 GGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT < 1:6160157/50‑1 gcAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT > 1:876804/3‑49 GTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGT > 1:5173884/1‑49 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA < 1:2865659/50‑1 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCA < 1:4408016/50‑1 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC > 1:2851692/1‑49 TAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTC > 1:1197939/1‑49 AAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > 1:1294812/1‑50 AAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > 1:7271100/1‑50 CGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/257851‑257907‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAA > NC_000913/258684‑258732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |