| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 155 [0] | [0] 165 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 153 (1.410) | 74/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
Only 100 of 153 total aligned reads displayed.
AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG > 1:6892461/1‑49AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:7748203/49‑1AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG > 1:1980714/1‑49 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:7233629/50‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:3157588/49‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:3878209/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:2101353/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:4373688/50‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT < 1:2935423/50‑1 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:2997129/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:5447949/49‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:1640477/50‑1 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA < 1:417552/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:4489506/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:5112736/50‑1 CAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATC < 1:4959667/50‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:7820383/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:6258774/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:6326314/50‑1 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:646683/1‑50 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG < 1:8201807/50‑1 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG < 1:5255518/50‑1 CAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGG < 1:2749378/50‑1 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 1:6222828/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:2291397/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:7053472/1‑50 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT < 1:491723/50‑1 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:6759545/1‑50 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT < 1:6943031/50‑1 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT < 1:2610360/50‑1 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT < 1:1039517/50‑1 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT < 1:231826/50‑1 AATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:2592350/1‑49 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA < 1:5804994/50‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT < 1:6734477/49‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT > 1:2144971/1‑49 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTc > 1:367722/1‑48 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 1:271476/1‑49 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAA < 1:3471382/49‑1 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAA < 1:5044876/49‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:2120679/1‑49 agATTCTCTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAAT < 1:1291563/47‑1 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA > 1:3858001/1‑50 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAAT < 1:4191404/49‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT < 1:3271862/50‑1 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:3939662/1‑49 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:4062665/1‑50 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA < 1:7229763/50‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA < 1:1178666/50‑1 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:7958911/1‑50 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:4415550/49‑1 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:1687958/1‑50 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA > 1:2161933/1‑50 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTAC < 1:3687464/49‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:6351713/1‑50 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACA < 1:1132650/49‑1 TGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG > 1:8002879/1‑50 GAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT > 1:1902500/1‑50 GAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT > 1:1946814/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:1353629/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG < 1:5621615/50‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:3959943/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT < 1:1050120/49‑1 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT < 1:1489139/49‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:6293635/1‑50 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT > 1:5632534/1‑50 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:5363675/50‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT > 1:5937171/1‑50 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT < 1:7734258/50‑1 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 1:8137765/50‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC < 1:3408446/50‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:74625/1‑49 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:3122167/49‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:4039612/49‑1 TTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC > 1:2085511/1‑49 TTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC > 1:6044732/1‑49 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCA < 1:7063785/49‑1 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA < 1:2530684/49‑1 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA < 1:3212944/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 1:895299/1‑50 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 1:3542168/1‑50 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 1:5338600/1‑50 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:5615761/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:5956538/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:5243600/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:4740868/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:6999102/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:6962403/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:4792037/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:1984158/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:5707318/49‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC < 1:783013/49‑1 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:1757468/1‑50 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:6682818/1‑49 TTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > 1:643144/1‑50 TTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTA > 1:5398329/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:256237/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:7437249/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:1749363/1‑50 TGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > 1:1529130/1‑50 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399806‑399854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |