| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,509,562 | Δ46,201 bp | [hicB]–maeA | 43 genes [hicB], ydcR, ydcS, ydcT, ydcU, ydcV, patD, yncL, ortT, ydcY, ydcZ, mnaT, curA, mcbR, yncD, yncE, ansP, yncG, yncH, rhsE, ydcD, yncO, yncI, ydcC, pptA, yddH, nhoA, yddE, narV, narW, narY, narZ, narU, yddJ, yddK, yddL, yddG, fdnG, fdnH, fdnI, yddM, adhP, maeA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1509562 | 1555762 | 46201 | 130 [0] | [0] 131 | [hicB]–maeA | [hicB],ydcR,ydcS,ydcT,ydcU,ydcV,patD,yncL,ortT,ydcY,ydcZ,mnaT,curA,mcbR,yncD,yncE,ansP,yncG,yncH,rhsE,ydcD,yncO,yncI,ydcC,pptA,yddH,nhoA,yddE,narV,narW,narY,narZ,narU,yddJ,yddK,yddL,yddG,fdnG,fdnH,fdnI,yddM,adhP,maeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1509561 | 0 (0.000) | 128 (1.180) | 69/98 | 0.0 | 100% | coding (54/417 nt) | hicB | antitoxin of the HicA‑HicB toxin‑antitoxin system |
| ? | NC_000913 | 1555763 = | 0 (0.000) | intergenic (‑94/+63) | maeA/sra | malate dehydrogenase, NAD‑requiring/30S ribosomal subunit protein S22 | |||||
Only 100 of 128 total aligned reads displayed.
ATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1509515‑1509561‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA > NC_000913/1555763‑1555811 ATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAA > 1:4521932/1‑50 TCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAA > 1:8302931/1‑49 TCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAA < 1:6935837/49‑1 TCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAA < 1:425874/49‑1 CCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAAC > 1:2542868/1‑49 CCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACA > 1:4775817/1‑49 CCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACA < 1:6633706/49‑1 CCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACA < 1:450490/49‑1 CCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACA > 1:3656156/1‑49 CCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACA > 1:3473140/1‑49 CGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAA > 1:915109/1‑49 CGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAA > 1:4974659/1‑49 CGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAA > 1:7006265/1‑49 CGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAA > 1:7698538/1‑49 GTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAA < 1:6864905/50‑1 GTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAA < 1:8094512/50‑1 TCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAA > 1:5767031/1‑50 CACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAA > 1:6713210/1‑49 ACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACA < 1:4487920/50‑1 ACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACA > 1:415081/1‑50 ACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACA < 1:8163604/50‑1 ACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACA > 1:7340032/1‑50 ACTCTTACACCCGCACCGGAAGGCGGTTATATGGTTTCTAAACAAAAACA < 1:28884/50‑1 CTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACAC < 1:7912631/50‑1 CTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACAC < 1:5437511/50‑1 CTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACAC < 1:8090976/50‑1 CTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCA > 1:2613204/1‑50 CTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCA > 1:6861215/1‑50 TTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCAT > 1:5560705/1‑50 TTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACC < 1:237295/48‑1 ACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTG > 1:913686/1‑50 ACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATT < 1:7169349/49‑1 ACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATT < 1:2687630/49‑1 ACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCA < 1:7670436/47‑1 CACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGC > 1:5460068/1‑50 CACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGC < 1:1819348/50‑1 CACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGC > 1:4049556/1‑50 CACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGC < 1:3018722/50‑1 CACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGC < 1:1905070/50‑1 CACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGC < 1:523167/50‑1 CACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTG < 1:4203384/49‑1 ACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCG < 1:3670330/50‑1 ACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCG > 1:7792972/1‑50 ACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCG > 1:3247076/1‑50 CCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCG > 1:2140970/1‑49 CCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCG > 1:7547040/1‑48 CGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAG < 1:6094002/50‑1 CGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAG > 1:1927292/1‑50 GCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGG < 1:4593128/50‑1 GCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGG < 1:4144385/50‑1 CGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGG > 1:444196/1‑49 GCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGC > 1:4037538/1‑49 CGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAAT < 1:5053712/50‑1 CGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAAT > 1:1467649/1‑50 CGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAAT > 1:5862344/1‑50 GGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATG < 1:4127592/50‑1 GGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATG > 1:3890129/1‑50 GGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATG < 1:5584426/50‑1 GAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGG < 1:3388513/50‑1 AAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGT > 1:7602670/1‑50 AGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTG > 1:6612270/1‑50 GGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGT > 1:531525/1‑50 GCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTT > 1:2215873/1‑50 GCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTT > 1:791425/1‑50 CGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTT < 1:6138766/50‑1 CGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTT < 1:5457956/50‑1 CGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTT > 1:6697991/1‑49 GGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTA < 1:6300236/50‑1 GGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTA < 1:8329397/50‑1 GGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTT > 1:7487428/1‑49 GGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTT > 1:7178989/1‑49 GGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTT > 1:5741262/1‑49 TTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAAT < 1:808874/50‑1 TTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAAT > 1:6525626/1‑50 TTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAAT < 1:879154/50‑1 TATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATC > 1:7037424/1‑50 TATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATC > 1:3580690/1‑50 TATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGT < 1:1288234/50‑1 TATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGT > 1:3937362/1‑50 TATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCG < 1:2461367/49‑1 ATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGT > 1:597198/1‑49 TGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCA < 1:8313497/50‑1 TGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCA > 1:1109195/1‑50 TGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTC < 1:5108216/49‑1 GTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATT > 1:2273370/1‑50 GTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATT < 1:2239416/50‑1 GTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATT < 1:1845226/50‑1 TTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATT > 1:5807547/1‑49 TTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATT > 1:696713/1‑48 TTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATT > 1:1181115/1‑48 TCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAG > 1:6786910/1‑50 TCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGA < 1:6496272/49‑1 CTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAG < 1:2878591/49‑1 CTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAG < 1:33962/49‑1 CTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAG > 1:1041349/1‑49 CTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAG > 1:321189/1‑49 TAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA > 1:6483174/1‑50 TAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA > 1:5802195/1‑50 TAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA > 1:1419431/1‑50 TAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA > 1:2062035/1‑50 ATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1509515‑1509561‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA > NC_000913/1555763‑1555811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |