| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 95 [0] | [0] 93 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 92 (0.850) | 58/98 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAC < 1:7589059/49‑1TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAC < 1:4969652/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG > 1:6656343/1‑50 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG < 1:6125744/50‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG > 1:3360560/1‑50 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 1:7318270/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 1:5489676/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 1:4234525/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 1:352406/49‑1 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC < 1:984228/50‑1 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC < 1:4669062/50‑1 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC > 1:2430531/1‑50 AGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCG < 1:3389484/50‑1 GCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG < 1:1553691/50‑1 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG > 1:3899257/1‑49 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG > 1:1908773/1‑49 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA > 1:6213870/1‑50 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA > 1:1583320/1‑50 GGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCAC > 1:7532847/1‑50 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACT < 1:7554974/50‑1 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCAC > 1:394141/1‑49 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCAC > 1:4687997/1‑49 GCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTA < 1:4167897/50‑1 GCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTA < 1:1133487/50‑1 GCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTA < 1:6235607/50‑1 GCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACT > 1:5578758/1‑49 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA < 1:4472810/50‑1 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA < 1:3755398/50‑1 AAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAAC > 1:8088163/1‑50 AACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC < 1:3470864/50‑1 AACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC > 1:5370958/1‑50 AACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC < 1:6928159/50‑1 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 1:1159440/50‑1 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 1:3063624/50‑1 TAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG > 1:6145772/1‑49 TAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG > 1:5261640/1‑49 AAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGA > 1:2209070/1‑50 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:578423/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:1215910/50‑1 GTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:1964678/1‑50 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGT < 1:4295671/50‑1 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:802370/1‑49 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTA < 1:7139629/49‑1 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:4642713/1‑47 GACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT > 1:35739/1‑50 GACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT > 1:7740522/1‑50 GACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT > 1:5472418/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:240003/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:5154347/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:1565915/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG < 1:2811513/50‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT < 1:8129600/49‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGA < 1:6797564/47‑1 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGT < 1:5219726/50‑1 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGT < 1:3597228/50‑1 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT > 1:5148142/1‑50 CGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATT < 1:791967/50‑1 CGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT > 1:6769701/1‑49 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 1:8308379/50‑1 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 1:3840764/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA > 1:4634109/1‑49 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC > 1:7542593/1‑49 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC > 1:4098028/1‑49 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTCTATTAC > 1:7924149/1‑49 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA > 1:1735803/1‑49 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA > 1:4294921/1‑49 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAA < 1:6284069/50‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAA < 1:1422251/50‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAA < 1:6744044/49‑1 GGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAG < 1:1203791/50‑1 GGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAG > 1:1379239/1‑50 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 1:5921590/50‑1 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 1:6980043/50‑1 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 1:886304/50‑1 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 1:3953887/50‑1 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 1:4082375/50‑1 AATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCG > 1:7205910/1‑50 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG < 1:7698567/50‑1 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG < 1:3554598/50‑1 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG < 1:7372380/50‑1 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG < 1:5227406/50‑1 TAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGC < 1:1529365/50‑1 AGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGC > 1:8071262/1‑49 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAA < 1:1417191/50‑1 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCA < 1:6505695/49‑1 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCA > 1:5405185/1‑49 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA < 1:8289803/50‑1 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAA > 1:3773465/1‑49 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAA < 1:6149645/50‑1 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA > 1:1057780/1‑48 CACAGGCGGCACTAACCCGGACGTAGACCGTATTACAAAAGCGGCAAAAA < 1:1030820/50‑1 ACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > 1:3220292/1‑50 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |