| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 95 [0] | [0] 93 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 92 (0.850) | 58/98 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
TTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCGT > NC_000913/2509582‑2509679 | ttGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa < 1:211634/49‑1 (MQ=255) tGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa > 1:2149806/1‑48 (MQ=255) tGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACa > 1:1696546/1‑48 (MQ=255) tGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAc < 1:7589059‑M1/49‑2 (MQ=255) tGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAc < 1:4969652‑M1/49‑2 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg > 1:6656343‑M1/1‑46 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg < 1:6125744‑M1/50‑5 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg > 1:3360560‑M1/1‑46 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 1:7318270‑M1/49‑4 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 1:5489676‑M1/49‑4 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 1:4234525‑M1/49‑4 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcag < 1:352406‑M1/49‑4 (MQ=255) aaGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggc < 1:4669062‑M1/50‑6 (MQ=255) aaGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggc < 1:984228‑M1/50‑6 (MQ=255) aaGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggc > 1:2430531‑M1/1‑45 (MQ=255) aGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcg < 1:3389484‑M1/50‑7 (MQ=255) gCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg < 1:1553691‑M1/50‑8 (MQ=255) cTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg > 1:1908773‑M1/1‑42 (MQ=255) cTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg > 1:3899257‑M1/1‑42 (MQ=255) tGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggca > 1:1583320‑M1/1‑41 (MQ=255) tGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggca > 1:6213870‑M1/1‑41 (MQ=255) gggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcac > 1:7532847‑M1/1‑40 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcact < 1:7554974‑M1/50‑12 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcac > 1:4687997‑M1/1‑39 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcac > 1:394141‑M1/1‑39 (MQ=255) gCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcacta < 1:6235607‑M1/50‑13 (MQ=255) gCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcacta < 1:4167897‑M1/50‑13 (MQ=255) gCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcacta < 1:1133487‑M1/50‑13 (MQ=255) gCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcact > 1:5578758‑M1/1‑38 (MQ=255) cAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaa < 1:3755398‑M1/50‑14 (MQ=255) cAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaa < 1:4472810‑M1/50‑14 (MQ=255) aaaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaac > 1:8088163‑M1/1‑36 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc < 1:3470864‑M1/50‑16 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc < 1:6928159‑M1/50‑16 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc > 1:5370958‑M1/1‑35 (MQ=255) aCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaaccc < 1:1159440‑M1/50‑17 (MQ=255) aCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaaccc < 1:3063624‑M1/50‑17 (MQ=255) tAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg > 1:6145772‑M1/1‑32 (MQ=255) tAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg > 1:5261640‑M1/1‑32 (MQ=255) aaGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccgga > 1:2209070‑M1/1‑31 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac < 1:1215910‑M1/50‑21 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac < 1:578423‑M1/50‑21 (MQ=255) gTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 1:1964678‑M1/1‑29 (MQ=255) tATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgt < 1:4295671‑M1/50‑23 (MQ=255) tATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 1:802370‑M1/1‑28 (MQ=255) tCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgta < 1:7139629‑M1/49‑24 (MQ=255) tCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 1:4642713‑M1/1‑26 (MQ=255) gACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact > 1:7740522‑M1/1‑23 (MQ=255) gACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact > 1:5472418‑M1/1‑23 (MQ=255) gACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact > 1:35739‑M1/1‑23 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactg > 1:5154347‑M1/1‑22 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactg > 1:240003‑M1/1‑22 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactg > 1:1565915‑M1/1‑22 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactg < 1:2811513‑M1/50‑29 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact < 1:8129600‑M1/49‑28 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtaga < 1:6797564‑M1/47‑26 (MQ=255) ccccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgt < 1:5219726‑M1/50‑30 (MQ=255) ccccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgt < 1:3597228‑M1/50‑30 (MQ=255) ccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat > 1:5148142‑M1/1‑19 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatt < 1:791967‑M1/50‑33 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat > 1:6769701‑M1/1‑18 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta < 1:3840764‑M1/50‑34 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta < 1:8308379‑M1/50‑34 (MQ=255) cATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta > 1:4634109‑M1/1‑16 (MQ=255) aTAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattac > 1:4098028‑M1/1‑15 (MQ=255) aTAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattac > 1:7542593‑M1/1‑15 (MQ=255) aTAAGGAATAGAACAcaggcggcactaacccggacgtagactctattac > 1:7924149‑M1/1‑15 (MQ=255) tAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattaca > 1:1735803‑M1/1‑14 (MQ=255) tAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattaca > 1:4294921‑M1/1‑14 (MQ=255) aGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaa < 1:1422251‑M1/50‑39 (MQ=255) aGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaa < 1:6284069‑M1/50‑39 (MQ=255) aGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaaa < 1:6744044‑M1/49‑38 (MQ=255) ggAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaag < 1:1203791‑M1/50‑40 (MQ=255) ggAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaag > 1:1379239‑M1/1‑11 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc < 1:6980043‑M1/50‑41 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc < 1:886304‑M1/50‑41 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc < 1:4082375‑M1/50‑41 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc < 1:3953887‑M1/50‑41 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc < 1:5921590‑M1/50‑41 (MQ=255) aaTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcg > 1:7205910‑M1/1‑9 (MQ=255) aTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcgg < 1:3554598‑M1/50‑43 (MQ=255) aTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcgg < 1:7372380‑M1/50‑43 (MQ=255) aTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcgg < 1:7698567‑M1/50‑43 (MQ=255) aTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcgg < 1:5227406‑M1/50‑43 (MQ=255) tAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcggc < 1:1529365‑M1/50‑44 (MQ=255) aGAACAcaggcggcactaacccggacgtagactgtattacaaaagcggc > 1:8071262‑M1/1‑6 (MQ=255) gAACAcaggcggcactaacccggacgtagactgtattacaaaagcggcaa < 1:1417191‑M1/50‑46 (MQ=255) gAACAcaggcggcactaacccggacgtagactgtattacaaaagcggca > 1:5405185‑M1/1‑5 (MQ=255) gAACAcaggcggcactaacccggacgtagactgtattacaaaagcggca < 1:6505695‑M1/49‑45 (MQ=255) aaCAcaggcggcactaacccggacgtagactgtattacaaaagcggcaaa < 1:8289803‑M1/50‑47 (MQ=255) aaCAcaggcggcactaacccggacgtagactgtattacaaaagcggcaa > 1:3773465‑M1/1‑4 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaa < 1:6149645‑M1/50‑49 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaa > 1:1057780‑M1/1‑2 (MQ=255) cacaggcggcactaacccggacgtagaccgtattacaaaagcggcaaaaa < 1:1030820‑M1/50‑49 (MQ=255) acaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaag > 1:3220292‑M1/1‑1 (MQ=255) | TTGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCGT > NC_000913/2509582‑2509679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |