| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 122 [0] | [0] 120 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 116 (1.090) | 67/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
Only 100 of 122 total aligned reads displayed.
CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3184732‑3184781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > NC_000913/3191698‑3191746 CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:3182594/50‑1CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:6891619/50‑1 GCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATA < 1:5809920/50‑1 GCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATA > 1:1210791/1‑50 GCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATA < 1:3676811/50‑1 GCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATA < 1:548744/50‑1 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT > 1:2207286/1‑50 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT > 1:4927415/1‑50 AATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC > 1:5077598/1‑49 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTA < 1:1970131/50‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTA < 1:7160581/50‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTA < 1:2656377/50‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT < 1:1306809/49‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT < 1:2100913/49‑1 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA < 1:73086/50‑1 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA > 1:2243742/1‑50 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA > 1:8208700/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA < 1:4021763/50‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:1876720/1‑50 TTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC < 1:1654073/50‑1 TTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC < 1:1496641/50‑1 TTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC < 1:1225753/50‑1 TAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC > 1:6204530/1‑49 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA < 1:5512779/49‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA < 1:509609/50‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA < 1:4364769/50‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAA < 1:1855100/49‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAA < 1:6767919/49‑1 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAAC < 1:4511034/50‑1 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA > 1:7707874/1‑49 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA > 1:1054033/1‑49 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA > 1:830085/1‑50 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA < 1:4819392/50‑1 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA < 1:7963779/50‑1 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC < 1:5884094/50‑1 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC < 1:6966437/50‑1 CAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT < 1:6231293/50‑1 CAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT < 1:6774131/50‑1 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTA < 1:2982933/50‑1 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTA < 1:5563983/50‑1 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT > 1:6327990/1‑49 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT > 1:3973353/1‑49 GCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTA > 1:4502492/1‑49 CAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAA < 1:7774263/50‑1 CAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAA > 1:2856776/1‑49 CAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAA > 1:4582564/1‑49 CAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAA > 1:1160681/1‑49 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA > 1:5799810/1‑50 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA < 1:4557415/50‑1 ACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAAC < 1:607288/50‑1 GCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGG > 1:1132788/1‑50 GCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGG > 1:5467927/1‑50 CATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGG < 1:2317851/50‑1 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:4474654/1‑50 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:3950532/1‑50 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC < 1:1532070/50‑1 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC < 1:2401813/50‑1 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC < 1:326724/50‑1 TAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCC < 1:1913756/50‑1 AGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA > 1:4804131/1‑50 AGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA > 1:8195054/1‑50 AGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA > 1:7731708/1‑50 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT < 1:4264958/50‑1 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:7144290/1‑50 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT < 1:5738427/50‑1 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA < 1:3019411/49‑1 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA < 1:549413/49‑1 TCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAG > 1:2916043/1‑50 TCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAG > 1:1577187/1‑50 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAG < 1:2676406/49‑1 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCA < 1:3824051/48‑1 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCA < 1:3895028/48‑1 ACATAATTCTTGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG < 1:143898/49‑1 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGC > 1:5563055/1‑50 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGC < 1:5363046/50‑1 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG < 1:6404372/49‑1 CATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCC < 1:4221855/50‑1 CATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCC > 1:2664050/1‑50 ATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCC < 1:6504010/50‑1 ATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCC > 1:7226563/1‑50 ATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCC < 1:28125/50‑1 ATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCC > 1:2769751/1‑50 TAATTCTTGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG > 1:7327054/1‑50 AATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:600119/1‑50 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTT < 1:5822947/50‑1 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:60352/1‑49 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:1432974/1‑49 TTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA < 1:5969611/50‑1 TTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA < 1:4215301/50‑1 CTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATA > 1:3824719/1‑50 CTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATA > 1:3996004/1‑50 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCA < 1:6232632/50‑1 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:682413/1‑48 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT < 1:6283138/48‑1 TTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAG > 1:1154425/1‑50 TATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTG > 1:8272499/1‑50 TATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGT < 1:3835234/49‑1 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT < 1:6697222/50‑1 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > 1:7468522/1‑50 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT < 1:1340505/50‑1 CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3184732‑3184781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > NC_000913/3191698‑3191746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |