| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 122 [0] | [0] 120 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 116 (1.090) | 67/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
Only 100 of 122 total aligned reads displayed.
CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGG > NC_000913/3184732‑3184830 | cGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:3182594‑M1/50‑1 (MQ=255)cGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:6891619‑M1/50‑1 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa < 1:5809920‑M1/50‑2 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa > 1:1210791‑M1/1‑49 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa < 1:3676811‑M1/50‑2 (MQ=255) gCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATa < 1:548744‑M1/50‑2 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat > 1:2207286‑M1/1‑48 (MQ=255) cTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATat > 1:4927415‑M1/1‑48 (MQ=255) aaTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatc > 1:5077598‑M1/1‑46 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatcta < 1:1970131‑M1/50‑6 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatcta < 1:7160581‑M1/50‑6 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatcta < 1:2656377‑M1/50‑6 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct < 1:1306809‑M1/49‑5 (MQ=255) aTGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatct < 1:2100913‑M1/49‑5 (MQ=255) tGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa < 1:73086‑M1/50‑7 (MQ=255) tGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa > 1:2243742‑M1/1‑44 (MQ=255) tGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaa > 1:8208700‑M1/1‑44 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata < 1:4021763‑M1/50‑9 (MQ=255) aTTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaata > 1:1876720‑M1/1‑42 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac < 1:1654073‑M1/50‑10 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac < 1:1496641‑M1/50‑10 (MQ=255) ttAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac < 1:1225753‑M1/50‑10 (MQ=255) tAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatac > 1:6204530‑M1/1‑40 (MQ=255) aGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaataca < 1:5512779‑M1/49‑11 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 1:509609‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa < 1:4364769‑M1/50‑13 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaa < 1:1855100‑M1/49‑12 (MQ=255) gCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaa < 1:6767919‑M1/49‑12 (MQ=255) cGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaac < 1:4511034‑M1/50‑14 (MQ=255) cGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa > 1:7707874‑M1/1‑37 (MQ=255) cGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaa > 1:1054033‑M1/1‑37 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca > 1:830085‑M1/1‑36 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca < 1:4819392‑M1/50‑15 (MQ=255) ggCAGCAACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaaca < 1:7963779‑M1/50‑15 (MQ=255) gcagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac < 1:5884094‑M1/50‑16 (MQ=255) gcagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacac < 1:6966437‑M1/50‑16 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact < 1:6231293‑M1/50‑17 (MQ=255) cagcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact < 1:6774131‑M1/50‑17 (MQ=255) agcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacacta < 1:2982933‑M1/50‑18 (MQ=255) agcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacacta < 1:5563983‑M1/50‑18 (MQ=255) agcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact > 1:6327990‑M1/1‑33 (MQ=255) agcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacact > 1:3973353‑M1/1‑33 (MQ=255) gcaACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacacta > 1:4502492‑M1/1‑32 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaa < 1:7774263‑M1/50‑20 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaa > 1:2856776‑M1/1‑31 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaa > 1:4582564‑M1/1‑31 (MQ=255) caACGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaa > 1:1160681‑M1/1‑31 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa > 1:5799810‑M1/1‑30 (MQ=255) aaCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaa < 1:4557415‑M1/50‑21 (MQ=255) aCGCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaac < 1:607288‑M1/50‑22 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg > 1:1132788‑M1/1‑27 (MQ=255) gCATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgg > 1:5467927‑M1/1‑27 (MQ=255) cATAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacggg < 1:2317851‑M1/50‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:4474654‑M1/1‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc > 1:3950532‑M1/1‑25 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc < 1:1532070‑M1/50‑26 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc < 1:2401813‑M1/50‑26 (MQ=255) aTAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggc < 1:326724‑M1/50‑26 (MQ=255) tAGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcc < 1:1913756‑M1/50‑27 (MQ=255) aGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca > 1:4804131‑M1/1‑23 (MQ=255) aGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca > 1:8195054‑M1/1‑23 (MQ=255) aGCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca > 1:7731708‑M1/1‑23 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat < 1:4264958‑M1/50‑29 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat > 1:7144290‑M1/1‑22 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccat < 1:5738427‑M1/50‑29 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca < 1:3019411‑M1/49‑28 (MQ=255) gCTTCACATAATTCTGGTTTATatctaatacaaacactaaaacgggcca < 1:549413‑M1/49‑28 (MQ=255) tCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag > 1:2916043‑M1/1‑19 (MQ=255) tCACATAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag > 1:1577187‑M1/1‑19 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcag < 1:2676406‑M1/49‑32 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:3824051‑M1/48‑31 (MQ=255) cacaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatca < 1:3895028‑M1/48‑31 (MQ=255) acaTAATTCTTGTTTATatctaatacaaacactaaaacgggccatcagg < 1:143898‑M1/49‑33 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggc > 1:5563055‑M1/1‑17 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggc < 1:5363046‑M1/50‑34 (MQ=255) acaTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcagg < 1:6404372‑M1/49‑33 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc < 1:4221855‑M1/50‑35 (MQ=255) caTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcc > 1:2664050‑M1/1‑16 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc < 1:6504010‑M1/50‑36 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc > 1:7226563‑M1/1‑15 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc < 1:28125‑M1/50‑36 (MQ=255) aTAATTCTGGTTTATatctaatacaaacactaaaacgggccatcaggccc > 1:2769751‑M1/1‑15 (MQ=255) tAATTCTTGTTTATatctaatacaaacactaaaacgggccatcaggcccg > 1:7327054‑M1/1‑14 (MQ=255) aaTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:600119‑M1/1‑13 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtt < 1:5822947‑M1/50‑39 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:60352‑M1/1‑12 (MQ=255) aTTCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgt > 1:1432974‑M1/1‑12 (MQ=255) ttCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta < 1:5969611‑M1/50‑40 (MQ=255) ttCTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgtta < 1:4215301‑M1/50‑40 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttata > 1:3824719‑M1/1‑9 (MQ=255) cTGGTTTATatctaatacaaacactaaaacgggccatcaggcccgttata > 1:3996004‑M1/1‑9 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatatca < 1:6232632‑M1/50‑45 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat > 1:682413‑M1/1‑6 (MQ=255) gTTTATatctaatacaaacactaaaacgggccatcaggcccgttatat < 1:6283138‑M1/48‑43 (MQ=255) tttATatctaatacaaacactaaaacgggccatcaggcccgttatatcag > 1:1154425‑M1/1‑5 (MQ=255) tatatctaatacaaacactaaaacgggccatcaggcccgttatatcagtg > 1:8272499‑M1/1‑3 (MQ=255) tatatctaatacaaacactaaaacgggccatcaggcccgttatatcagt < 1:3835234‑M1/49‑47 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgct < 1:6697222‑M1/50‑50 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgct > 1:7468522‑M1/1‑1 (MQ=255) tatctaatacaaacactaaaacgggccatcaggcccgttatatcagtgct < 1:1340505‑M1/50‑50 (MQ=255) | CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGG > NC_000913/3184732‑3184830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |