| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 765,208 | Δ5,405 bp | [mngR]–mngB | [mngR], mngA, mngB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 765208 | 770612 | 5405 | 83 [0] | [0] 85 | [mngR]–mngB | [mngR],mngA,mngB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 765207 | 0 (0.000) | 82 (0.770) | 47/96 | 0.2 | 100% | coding (669/723 nt) | mngR | DNA‑binding transcriptional repressor MngR |
| ? | NC_000913 | 770613 = | 0 (0.000) | intergenic (+2/‑845) | mngB/cydA | alpha‑mannosidase/cytochrome bd‑I ubiquinol oxidase subunit I | |||||
CGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCATCGGTATTAAAAGCGTTGCGGCTATATTCAAACACCCGACCATCAACTAAATATCC > NC_000913/765157‑765254 | cgcgATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:5844512‑M1/1‑50 (MQ=255) gcgATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAt < 1:4445582‑M1/50‑2 (MQ=255) cgATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAta < 1:4175234‑M1/50‑3 (MQ=255) gatgatTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtag > 1:6718058‑M1/1‑47 (MQ=255) gatgatTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtag > 1:4878337‑M1/1‑47 (MQ=255) gatgatTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtag > 1:2585981‑M1/1‑47 (MQ=255) atgatTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagc < 1:6169912‑M1/50‑5 (MQ=255) tgatTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagca < 1:2675961‑M1/50‑6 (MQ=255) cgattTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagc > 1:3004855‑M1/2‑45 (MQ=255) gatTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaa > 1:5328323‑M1/1‑44 (MQ=255) gatTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaa > 1:1559237‑M1/1‑44 (MQ=255) atTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaat > 1:750955‑M1/1‑43 (MQ=255) atTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaa < 1:4470323‑M1/49‑7 (MQ=255) ttttCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaat > 1:943518‑M1/1‑42 (MQ=255) tttCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatc > 1:8261873‑M1/1‑41 (MQ=255) tttCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatc > 1:4640906‑M1/1‑41 (MQ=255) tCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaa < 1:435804‑M1/49‑11 (MQ=255) tCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaa < 1:1036458‑M1/49‑11 (MQ=255) tCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaa < 1:6880173‑M1/49‑11 (MQ=255) tCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaa < 1:178319‑M1/49‑11 (MQ=255) tCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaa < 1:7945444‑M1/49‑11 (MQ=255) tCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaa < 1:2755942‑M1/49‑11 (MQ=255) cGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaac > 1:3974461‑M1/1‑38 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaatc > 1:4750969‑M1/1‑37 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaacc < 1:7886729‑M1/50‑14 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaacc > 1:7783764‑M1/1‑37 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaacc < 1:729873‑M1/50‑14 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaacc < 1:1390693‑M1/50‑14 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaacc > 1:5332923‑M1/1‑37 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaacc < 1:6491303‑M1/50‑14 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaac < 1:4262621‑M1/49‑13 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaac < 1:6598643‑M1/49‑13 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaac < 1:7551498‑M1/49‑13 (MQ=255) gCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaac < 1:1032473‑M1/49‑13 (MQ=255) cgcTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaag < 1:7175261‑M1/50‑18 (MQ=255) cgcTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaag < 1:3011220‑M1/50‑18 (MQ=255) cgcTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaa < 1:897730‑M1/49‑17 (MQ=255) cgcTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaa < 1:2725883‑M1/49‑17 (MQ=255) gcTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagc > 1:3541446‑M1/1‑32 (MQ=255) gcTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagc < 1:2464680‑M1/50‑19 (MQ=255) gcTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagc > 1:7464288‑M1/1‑32 (MQ=255) gcTATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagc < 1:3644006‑M1/50‑19 (MQ=255) tATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagcca > 1:5986028‑M1/1‑30 (MQ=255) tATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagcca > 1:1187048‑M1/1‑30 (MQ=255) tATCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagcca > 1:5328314‑M1/1‑30 (MQ=255) tCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagccaca > 1:5071465‑M1/1‑28 (MQ=255) tCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagcca < 1:2182103‑M1/48‑21 (MQ=255) tCAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagcca < 1:5333171‑M1/48‑21 (MQ=255) cAGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagccaca > 1:3186145‑M1/1‑27 (MQ=255) aGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagccacata < 1:1788143‑M1/50‑25 (MQ=255) aGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagccacata > 1:4454851‑M1/1‑26 (MQ=255) aGGGTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagccacata > 1:5755559‑M1/1‑26 (MQ=255) gggTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagccacatat < 1:1650856‑M1/50‑26 (MQ=255) gggTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagccacatat < 1:4371228‑M1/50‑26 (MQ=255) gggTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagccacatat > 1:1659936‑M1/1‑25 (MQ=255) gggTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagccacatat > 1:7385281‑M1/1‑25 (MQ=255) ggTAAA‑TTATAGTCATCGGTATTAtagcaatcaaaccgaagccacatatg > 1:3213516‑M1/1‑24 (MQ=255) aattatAGTCATCGGTATTAtagcaatcaaaccgaagccacatatgcgcg < 1:1911625‑M1/48‑31 (MQ=255) ttATAGTCATCGGTATTAtagcaatcaaaccgaagccacatatgcgcggc < 1:2613707‑M1/50‑33 (MQ=255) ttATAGTCATCGGTATTAtagcaatcaaaccgaagccacatatgcgcggc < 1:7818616‑M1/50‑33 (MQ=255) tataGTCATCGGTATTAtagcaatcaaaccgaagccacatatgcgcggc > 1:6848672‑M1/1‑17 (MQ=255) tataGTCATCGGTATTAtagcaatcaaaccgaagccacatatgcgcggc > 1:7590058‑M1/1‑17 (MQ=255) taGTCATCGGTATTAtagcaatcaaaccgaagccacatatgcgcggccag < 1:6726349‑M1/50‑36 (MQ=255) taGTCATCGGTATTAtagcaatcaaaccgaagccacatatgcgcggcca < 1:1661822‑M1/49‑35 (MQ=255) taGTCATCGGTATTAtagcaatcaaaccgaagccacatatgcgcggc > 1:128738‑M1/1‑15 (MQ=255) aGTCATCGGTATTAtagcaatcaaaccgaagccacatatgcgcggc > 1:785121‑M1/1‑14 (MQ=255) gTCATCGGTATTAtagcaatcaaaccgaagccacatatgcgcggccagat < 1:6716962‑M1/50‑38 (MQ=255) cATCGGTATTAtagcaatcaaaccgaagccacatatgcgcggccagattg > 1:5054005‑M1/1‑11 (MQ=255) aTCGGTATTAtagcaatcaaaccgaagccacatatgcgcggccagattgt > 1:1553508‑M1/1‑10 (MQ=255) aTCGGTATTAtagcaatcaaaccgaagccacatatgcgcggccagattg < 1:1589940‑M1/49‑40 (MQ=255) tCGGTATTAtagcaatcaaaccgaagccacatatgcgcggccagattgtt < 1:7262216‑M1/50‑42 (MQ=255) tCGGTATTAtagcaatcaaaccgaagccacatatgcgcggccagattgtt < 1:3786361‑M1/50‑42 (MQ=255) tCGGTATTAtagcaatcaaaccgaagccacatatgcgcggccagattgtt > 1:4628407‑M1/1‑9 (MQ=255) cGGTATTAtagcaatcaaaccgaagccacatatgcgcggccagattgtt > 1:38578‑M1/1‑8 (MQ=255) ggTATTAtagcaatcaaaccgaagccacatatgcgcggccagattgttga > 1:1616449‑M1/1‑7 (MQ=255) ggTATTAtagcaatcaaaccgaagccacatatgcgcggccagattgttg < 1:2653745‑M1/49‑43 (MQ=255) ggTATTAtagcaatcaaaccgaagccacatatgcgcggccagattgttg < 1:2026878‑M1/49‑43 (MQ=255) gTATTAtagcaatcaaaccgaagccacatatgcgcggccagattgttgac < 1:1937323‑M1/50‑45 (MQ=255) tattatagcaatcaaaccgaagccacatatgcgcggccagattgttgaca < 1:1253252‑M1/50‑46 (MQ=255) ttatagcaatcaaaccgaagccacatatgcgcggccagattgttgacaaa < 1:6089358‑M1/50‑48 (MQ=255) ttatagcaatcaaaccgaagccacatatgcgcggccagattgttgaca > 1:5091245‑M1/1‑3 (MQ=255) ttatagcaatcaaaccgaagccacatatgcgcggccagattgttgaca > 1:5920715‑M1/1‑3 (MQ=255) ttatagcaatcaaaccgaagccacatatgcgcggccagattgttgaca > 1:6435395‑M1/1‑3 (MQ=255) | CGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCATCGGTATTAAAAGCGTTGCGGCTATATTCAAACACCCGACCATCAACTAAATATCC > NC_000913/765157‑765254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |