| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 136 [0] | [0] 132 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 132 (1.210) | 67/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
Only 100 of 136 total aligned reads displayed.
CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 | cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:7725343/1‑50 (MQ=255)cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:3567180/1‑50 (MQ=255) tttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:145659‑M1/1‑49 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:4867755‑M1/1‑48 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:6495276‑M1/1‑48 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcg > 1:3432306‑M1/1‑47 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc < 1:1108588‑M1/48‑2 (MQ=255) tATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc < 1:159583‑M1/48‑2 (MQ=255) tGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa < 1:7068965‑M1/50‑6 (MQ=255) tGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa < 1:5478110‑M1/50‑6 (MQ=255) tGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa < 1:1473547‑M1/50‑6 (MQ=255) gCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:7422088‑M1/1‑44 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaag < 1:305285‑M1/49‑7 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaaca < 1:4923058‑M1/50‑8 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaac < 1:274766‑M1/49‑7 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:4870175‑M1/1‑43 (MQ=255) cAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:5385586‑M1/1‑43 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag < 1:4246525‑M1/50‑9 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag < 1:7443921‑M1/50‑9 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag < 1:5410426‑M1/50‑9 (MQ=255) aaTATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacag > 1:6578201‑M1/1‑42 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt < 1:2781269‑M1/50‑10 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:5491439‑M1/50‑11 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt > 1:3468655‑M1/1‑40 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:7559656‑M1/50‑11 (MQ=255) atGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc > 1:2439386‑M1/1‑39 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg < 1:4575047‑M1/50‑13 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg > 1:590854‑M1/1‑38 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc < 1:503990‑M1/49‑12 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc > 1:8268991‑M1/1‑36 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc > 1:8269582‑M1/1‑36 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:1218997‑M1/50‑15 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:3898364‑M1/50‑15 (MQ=255) aaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcg < 1:2460264‑M1/50‑16 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg < 1:4270417‑M1/50‑17 (MQ=255) aTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgg < 1:2275906‑M1/50‑17 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg < 1:6288233‑M1/50‑18 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg > 1:6073532‑M1/1‑33 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg < 1:6474534‑M1/50‑18 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg < 1:5108109‑M1/50‑18 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg > 1:729376‑M1/1‑33 (MQ=255) tGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcggg > 1:3308098‑M1/1‑33 (MQ=255) gCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggc > 1:5623631‑M1/1‑32 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:4561110‑M1/1‑31 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct < 1:8177709‑M1/50‑20 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:504938‑M1/50‑21 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:5451233‑M1/50‑21 (MQ=255) aTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctga < 1:6754912‑M1/50‑22 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaa < 1:4413080‑M1/50‑23 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:4642035‑M1/1‑28 (MQ=255) tGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:6337233‑M1/1‑28 (MQ=255) gTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:1307549‑M1/1‑27 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:1429795‑M1/1‑25 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:7813989‑M1/1‑25 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:182624‑M1/1‑25 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:4873740‑M1/49‑26 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:5670980‑M1/49‑26 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatt < 1:5299928‑M1/49‑27 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatt < 1:5805068‑M1/49‑27 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt < 1:271563‑M1/50‑30 (MQ=255) tatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattatt > 1:6320025‑M1/1‑21 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:370847‑M1/1‑20 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct < 1:1347038‑M1/50‑32 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct < 1:4423547‑M1/50‑32 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct < 1:6157790‑M1/50‑32 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc < 1:5904615‑M1/49‑31 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc < 1:7990224‑M1/49‑31 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc < 1:7308435‑M1/49‑31 (MQ=255) cATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt > 1:4668487‑M1/1‑18 (MQ=255) cATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt > 1:3233220‑M1/1‑18 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttg < 1:666121‑M1/50‑34 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt < 1:6845644‑M1/49‑33 (MQ=255) aTTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt < 1:1729142‑M1/49‑33 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc < 1:3356480‑M1/50‑35 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc < 1:1586927‑M1/50‑35 (MQ=255) ttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:5729599‑M1/1‑14 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc < 1:363072‑M1/49‑37 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:883732‑M1/1‑13 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:4622577‑M1/1‑13 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:3964342‑M1/1‑13 (MQ=255) cAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcga > 1:4979651‑M1/1‑12 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:7465387‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:5875054‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:6106666‑M1/1‑11 (MQ=255) aaGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgat > 1:6607398‑M1/1‑11 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt > 1:921590‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt > 1:2025683‑M1/1‑10 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagatattcttgcgcgattt > 1:7030590‑M1/1‑10 (MQ=255) ggAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgattt > 1:155155‑M1/1‑9 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttg < 1:7489043‑M1/50‑43 (MQ=255) gAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatttg < 1:2390253‑M1/50‑43 (MQ=255) ccgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcc > 1:2947359‑M1/1‑5 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca < 1:7356559‑M1/50‑47 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca > 1:1263130‑M1/1‑4 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca > 1:5499940‑M1/1‑4 (MQ=255) cgaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgccca > 1:2138239‑M1/1‑4 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:4788044‑M1/50‑48 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc > 1:1005434‑M1/1‑2 (MQ=255) accgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatc < 1:716784‑M1/50‑49 (MQ=255) ccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccatcg < 1:6777261‑M1/50‑50 (MQ=255) | CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAATA > NC_000913/2601151‑2601249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |